Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq33 82.4 6e-11 >seq33 Length=689618 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 46501 CAAACCACCATTACAACCTAAATCAACTTCATCGCAATCTAACAGTTGCTGTTCGGACAG 46560 || |||||| | || ||| ||| | || ||||||||||| ||||| ||| ||||| | Sbjct 460267 CAGACCACCTTCGCAGCCTTCATCCAGTTTATCGCAATCTACCAGTTCCTGCTCGGAGAA 460326 Query 46561 ATCTATTAATTTGTTGTGCCGTATGGCATATTGACTTTCAATATTGCCTATTGCTACGAA 46620 | | || ||||||| || || | || | ||| ||||| ||| || || || Sbjct 460327 GGACAACAGCTTTTTGTGCCTTAATGCGAACTGCCCTTCGATATTCCCTGTTACTGAAAA 460386 Query 46621 AGCCCAACACGATCCGCAAACTCCTTGATCTTTTATGGGAGTCAC 46665 ||||||||| ||||| || ||||||||||| | |||||||| Sbjct 460387 AGCCCAACAGGATCCACACTGACCTTGATCTTTAACTGGAGTCAC 460431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418299228197120