Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq38 91.5 1e-13 >seq38 Length=2292016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 || || || || || |||| |||||||||||| || | ||||| ||||| | || Sbjct 218944 ATATAAGTGTCTATTAGTAGAGAATACATTTCAGAATGAACATTTTCCATAGCCACTTGG 218885 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAA 14048 || |||||||| |||| |||||| | |||||| ||| || | ||| | |||| | | Sbjct 218884 AATCCATAAAAGCATCGAGCTTCCGTAACTTGTACTTCCTGACT-AAACCGTTCTACAAG 218826 Query 14049 GTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087 |||||||| || ||||||||| ||| ||||| ||||| Sbjct 218825 ATTTTCATTGACGATACCATCAGAAGCAGCAAAGAATGC 218787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478583200511040