Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq88 86.0 7e-12 >seq88 Length=2672896 Score = 86.0 bits (94), Expect = 7e-12 Identities = 167/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 6910 TATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGAT 6969 ||||| | || || |||||| || | ||| || ||||| || | |||||| || || | Sbjct 1503138 TATGTAAGTAGTGAATAAGATGCGATATTGAATGGTACTCCAAGTCCCATGTCGGCGCTT 1503079 Query 6970 CTTTGATAACATTGACAAGATAAAATATTGTCT-ATAGCATAAAATTGACACAATACA-T 7027 ||||| ||| ||| || || || ||| ||| |||||||||| ||||| ||| | Sbjct 1503078 CTTTGGTAAAGTTGGCAGGACAATTCTCCGTCGCATA-CATAAAATTG-CACAAGACAAT 1503021 Query 7028 GACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATAC 7087 ||||||| || || | ||| ||| | || | ||| |||||||||| ||| | Sbjct 1503020 GACATGGTGGCAAGGCCATCTGGGGAATACTAACGGGGTCCCATGCAGTCATTATAATTC 1502961 Query 7088 GTCTATCATTTGGATTTGTTTTTAATTTTGT-TATAATTATTTGTAATTGATCTATACC 7145 || |||| ||| | ||||||||||||||| |||| | | || ||||| ||||| Sbjct 1502960 TCCTGTCATCTGG-TGTGTTTTTAATTTTGTGAATAACTTCTCTCAACTGATCGATACC 1502903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595865028297600