Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq38 91.5 2e-13 >seq38 Length=2292016 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 21127 TTAAAAATCAGCATCTAATG-AGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||||| || || ||||| ||||| ||| || |||| ||| ||| | |||| | Sbjct 219826 TTAAAAGTCGGCGG-TAATGGAGAAAGTATTTTCCACTTTCTTTTGCATCACTCCCCACT 219768 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 | ||||| |||| |||| | || || || |||||||| ||||| || | || ||| || Sbjct 219767 TCTGATATTCACCAACTTTCTTCTCAAAGAAATTTGTTTTTCCCTCAAGGGAAATATGTT 219708 Query 21246 CCATAAAATCAAATGGATTTTCAGATT 21272 ||||||||||||||||||| || |||| Sbjct 219707 CCATAAAATCAAATGGATTCTCTGATT 219681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531894576760640