Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq116 84.2 2e-11 >seq116 Length=4125705 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || ||||||| | || |||||||| || ||| | ||| ||| || | Sbjct 2790327 ATGCAGATCTTCGTTAAAACGCTCACTGGCAAAACAATCACCTTAGAAGTGGAGGCGTCC 2790386 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | || || ||| |||||||| || | ||| | || Sbjct 2790387 GACACGATTGAAAACGTCAAAACTAAGATTCAGGATAAAGAAGGCATTCCTCCGGATCAG 2790446 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | |||||||||||||| ||||| |||||| || | |||| |||||| Sbjct 2790447 CAGAGATTAATCTTTGCTGGCAAGCAACTCGAAGATGGCCGTACCCTCTCCGACTACAAT 2790506 Query 22014 ATTCAGAAGGAATCTACTCTTCAT 22037 ||||||||||| || ||||| ||| Sbjct 2790507 ATTCAGAAGGAGTCCACTCTGCAT 2790530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358120714691344