Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq25 84.2 5e-11 >seq25 Length=4911174 Score = 84.2 bits (92), Expect = 5e-11 Identities = 184/271 (68%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 297435 TTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACT 297494 |||| ||||| || || | |||||| || |||||||| | |||| |||||| | Sbjct 1973843 TTGTAAAAATGTAACGAGGGCTCGCGGAGTCTTTACCACCACAAAGCCTCGTACCGAATT 1973784 Query 297495 GGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCA 297554 | || | || | | | || ||||| ||||| ||||| | | ||||| | || | Sbjct 1973783 GACCATTGGGTTGAAGCAAATTTATGTTGTTGCTACCGACGAAGTTTTGTGCTAAATTAA 1973724 Query 297555 CGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAAC 297614 |||||| | || || |||||||||||||||| ||| ||| || ||||| ||| Sbjct 1973723 TGATGGTTGCCATAAGGGACACTTCGCCATGGTGATACGCGGAATGTTCGGCAACTGAAC 1973664 Query 297615 CGCTGAACTGTGCAACCTTCACGT--CGGTCGTCAAATTGCGCTTGAAAGC-TGAATATA 297671 | | ||| || ||||| || | || | ||| ||| ||||| ||||| | || | Sbjct 1973663 CAGATAGCTGCGCTACCTTGACTTCACGTTTGTC--ATTACGCTT-AAAGCACGTGTACA 1973607 Query 297672 TCACTTTCCGTTGAGAAGGTTTGAAACCATC 297702 | ||||| | ||| |||||||||||| || Sbjct 1973606 TTACTTTTCTCTGACCAGGTTTGAAACCGTC 1973576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102866773711600