Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05]
936 sequences; 201,220,334 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq116 118 1e-21
>seq116
Length=4125705
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| ||||| || ||||| ||||| || || | | || || | ||
Sbjct 2789854 AGGACCAGGTGAAGGGTCGACTCCTTTTGGATGTTATAGTCGGATAAAGTACGGCCATCC 2789795
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||||||| | ||||| | ||||||||| || || |||||||| || |||
Sbjct 2789794 TCTAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCTTCCTTGTCT 2789735
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||||||| ||| | || || || || ||||| | || | ||||
Sbjct 2789734 TGGATCTTCGCCTTTACATTCTCGATCGTGTCGGAAGCCTCGACTTCCAGGGTGATGGTC 2789675
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||| || | ||| || || ||||| ||||||
Sbjct 2789674 TTGCCAGTGAGAGTCTTAACAAAAATCTGCATT 2789642
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||||| | || || || |||| ||||| || || || |||||||| || |
Sbjct 2789641 CCACCGCGCAGACGCAGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2789582
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | || || ||||||||||||||| | ||||| | |||||| || || |||
Sbjct 2789581 AGAGTGCGGCCATCCTCTAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGATCTGGTGGA 2789522
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
||||| || || || || || ||| ||| || ||| | ||||| || || |||
Sbjct 2789521 ATTCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCGATGGTATCGGAAGCCTCGACT 2789462
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
|| | || | |||||||||||| | || || ||||
Sbjct 2789461 TCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTAACGA 2789425
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || |||| |||| ||| || |||||||||||||||||||| | | ||||| |
Sbjct 2790085 CTGAGGACTAAGTGAAGCGTTGACTCTTTTTGAATGTTGTAATCAGATAATGTGCGACCA 2790026
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| | |||||||||||| | || | || || || || || ||||||||||||||
Sbjct 2790025 TCTTCTAACTGCTTGCCGGCGAAGATCAACCTTTGTTGATCTGGGGGAATTCCTTCTTTG 2789966
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|| || || || ||| || || | ||| || || ||||| || | || | |
Sbjct 2789965 TCCTGAATCTTGGCCTTAACGTTTTCAATTGTGTCGGATGCCTCCACCTCCAATGTAATG 2789906
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||||||| || | || || || || || ||||||
Sbjct 2789905 GTCTTGCCTGTAAGGGTCTTAACAAAGATCTGCATT 2789870
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| ||||| || || || ||||||||||| | | || || ||||
Sbjct 2789415 AGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCC 2789356
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || ||||||||||| | || | || |||||| ||||| |||||||| || || |||
Sbjct 2789355 TCCAGTTGCTTGCCGGCGAAGATCAACCTCTGCTGATCGGGTGGAATTCCCTCCTTATCT 2789296
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||||||| || | || || || || || || | || | ||||
Sbjct 2789295 TGAATCTTCACCTTTACATTTTCAATAGTGTCGGAAGCCTCGACCTCGAGGGTAATGGTC 2789236
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || ||||| || || || ||||| ||||| ||
Sbjct 2789235 TTCCCAGTCAATGTCTTGACAAAAATCTGCATGTT 2789201
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| |||| ||| | || || || || || ||||||||||| | | ||||| | ||
Sbjct 2790995 AAGTACTAAATGTAGGGTGGACTCCTTCTGGATGTTGTAATCGGATAATGTGCGTCCATC 2790936
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| || || || || || | ||||| ||||| ||||| || ||||||||||| || ||
Sbjct 2790935 CTCGAGTTGTTTCCCAGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATTCCTTCCTTATC 2790876
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| ||||| |||||| ||| | || || || || ||||| | ||| | |||
Sbjct 2790875 TTGAATTTTGACCTTTACGTTCTCGATCGTGTCCGACGCCTCGACTTCCAGAGTGATGGT 2790816
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | || || ||||| || |||||
Sbjct 2790815 TTTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 2790783
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 154029 TGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGAT 154088
||||| || |||| | || || || ||| | || |||||| |||| || | |||
Sbjct 2591403 TGAAACTCTCCGGAGAGGACTCGTCGGGTATAGATGTTACTGGTGTACGGTTCAATGGAT 2591462
Query 154089 TCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAG 154148
|||||||| || || || || ||||||| ||| || ||||| || | | ||||||
Sbjct 2591463 TCGTTGTTTCCCAAAATCTGTGCTGTAGATGCCGTAGGCATTGGGGCGATAAGCAAAGAA 2591522
Query 154149 TTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTA 154208
|| || | |||||||||||| || ||| | | ||||||| ||||| | || ||
Sbjct 2591523 TTGCGAACACCGTGTTTTGCTATTTTTTCTTTCAGAGCTGCCCAGTTCCAAAGATTAGTC 2591582
Query 154209 GGTTGCACGTTCCACATGTCGTATTGCAAAA 154239
|| ||| |||||| ||||| |||||||
Sbjct 2591583 GGCGTTACGCCCCACATATCGTACTGCAAAA 2591613
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| |||| ||| | || ||||| |||||||| || ||||| | | ||||| | |||
Sbjct 2790310 AGGACTAAATGCAGAGTAGATTCCTTTTGAATATTATAATCAGACAGCGTGCGACCATCT 2790251
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||||| || | || | | |||||||||||| || |||||||| || ||
Sbjct 2790250 TCTAATTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCGGGTGGGATTCCTTCCTTGTCC 2790191
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| || ||| | ||||| || || || || | ||| | |||
Sbjct 2790190 TGGA-TCTTAGCTTTAACGTTCTCAATGGTATCGGATGCTTCGACCTCCAAAGTGATGGT 2790132
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| || || | ||| || || || || ||||||
Sbjct 2790131 CTTACCTGTAAGAGTCTTAACAAAGATCTGCATT 2790098
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646
|| || || ||||| ||||| | ||| |||| ||| || | || ||||||| ||
Sbjct 2592131 GAAGCTAAATTGCATACGGCTACTTCATCAGGACTGGAATACTCAACGATTTCTGTACAG 2592190
Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706
| ||| |||| | ||| ||||| || |||| ||||||||||| ||||| |||
Sbjct 2592191 AGATTGCTGCTTTTAATTGTGCCTAGATTTTGTTGATTCGATTTACGATTGCAGTGATCT 2592250
Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGG 154743
|| |||| |||||||| || || ||||| |||||||
Sbjct 2592251 TTATACAGCATGTACGGAGTTCCAGTTTCAACTTGGG 2592287
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || ||| || | ||||| | | || ||||| ||||||||||| ||||
Sbjct 2790782 ACCTCCACGAAGTCGAAGAACCAAATGAAGCATTGACTCTTTCTGAATGTTGTAGTCTGA 2790723
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || || | || || || || | || | || ||||||||| || ||
Sbjct 2790722 AAGCGTTCGACCATCCTCCAATTGTTTTCCAGCGAAGATTAACCTCTGCTGGTCTGGCGG 2790663
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| ||||| || || || | |||| ||||| || || | || || || ||||
Sbjct 2790662 GATCCCTTCCTTATCCTG-AATTTTGGCTTTAACGTTTTCGATGGTGTCCGATGCTTCCA 2790604
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | |||| |||||||| || | ||||| || ||||| |||||
Sbjct 2790603 CCTCCAAGGTTATCGTCTTGCCCGTAAGGGTTTTGACAAAAATCTGCAT 2790555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499638954155840
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