Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 7e-12 >seq38 Length=2292016 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| |||||||||||||| ||| ||||| |||||||| || | || | Sbjct 219271 CCTCATCTCTAGAAATAAGTTCATTACTAAAGGTAAGGCCAGGCATGAGTCCTCTTTTTT 219212 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||||||| ||||||| ||| || || | ||||| |||||||| ||| ||||| Sbjct 219211 TCAACCAGAAAATAGCTGCAAAACTGCCACTA-AAGAAAATACCCTCTACAGCAGCAAAG 219153 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTG-TCAAACCATTTCATTGCCCATTT 117470 || | || ||||| | || | || | || || | || ||| || | |||||| || Sbjct 219152 GCCACAACACGCTCCCCAAATG-TCGCGGATTCATGATTAATCCAATTTAGTGCCCAGTT 219094 Query 117471 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515 || ||||| | | |||||| | ||| ||||| | |||||| Sbjct 219093 TGCTTTCTTAGCGACACATGGAAGGTTTTCAATGGCATTAAATAA 219049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973897224640