Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq19 123 3e-23 >seq19 Length=2201758 Score = 123 bits (136), Expect = 3e-23 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 154862 ACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAG 154921 ||| || || | ||||| ||||| || || ||| ||||||| |||||| | || || Sbjct 804097 ACTATCTTGCTTAATGATCACATATCCTTCGACAAATGGTGTTTTTGAAGAAACTATCAG 804156 Query 154922 ACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCT 154981 | | || || || ||| | |||||| |||||||| | || || || ||| | Sbjct 804157 TGATGTTTGCGGAATGGTACATAATGCTGGTGGGCAGGTATACTTAGACGGTGCTAATAT 804216 Query 154982 AAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAA 155041 |||||||| || |||||| ||| | || |||||| || || | |||||| || Sbjct 804217 GAATGCACAAGTGGGACTATGTCGACCTGGAGATTATGGTAGTGACGTTTCTCATCTCAA 804276 Query 155042 CTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGG 155101 || |||||||||||||||||||| |||||||||||||| ||||| | || || || || Sbjct 804277 TTTGCATAAAACATTCTGTATTCCCCATGGAGGTGGAGGACCTGGAATGGGACCCATTGG 804336 Query 155102 TGT 155104 || Sbjct 804337 GGT 804339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206023210240