Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq19 136 5e-27 >seq19 Length=2201758 Score = 136 bits (150), Expect = 5e-27 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 159537 ACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAG 159596 ||| || || | ||||| |||||||| || ||| ||||||| |||||| || ||||| Sbjct 804097 ACTATCTTGCTTAATGATCACATATCCTTCGACAAATGGTGTTTTTGAAGAAACTATCAG 804156 Query 159597 ACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCT 159656 | | || || || ||| | |||||| |||||||| | || ||||| ||| | Sbjct 804157 TGATGTTTGCGGAATGGTACATAATGCTGGTGGGCAGGTATACTTAGACGGTGCTAATAT 804216 Query 159657 AAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAA 159716 |||||||| || || ||| ||| | || |||||| || || | |||||| || Sbjct 804217 GAATGCACAAGTGGGACTATGTCGACCTGGAGATTATGGTAGTGACGTTTCTCATCTCAA 804276 Query 159717 CTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGG 159776 || ||||| |||||||||||||| |||||||||||||| ||||| | || || ||||| Sbjct 804277 TTTGCATAAAACATTCTGTATTCCCCATGGAGGTGGAGGACCTGGAATGGGACCCATTGG 804336 Query 159777 TGT 159779 || Sbjct 804337 GGT 804339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044319800960