Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq88 84.2 3e-11 >seq88 Length=2672896 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 104857 TATTCTTAAAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGA 104916 |||| || | || |||| ||| | || | ||| | || ||||| || |||| | Sbjct 1502624 TATTGTTGAGGAGCTATTGTGGTTTATCAGAGGCTGTACTAATTCAAAGGAGTTAGCAGC 1502683 Query 104917 AATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATT 104976 | ||||| || | ||||| | ||| | || || ||| | ||| |||||| || Sbjct 1502684 GAAGGGTGTCAACATTTGGAACGCCAATAGCTCTCGGTCTTTTCTTGATAGTTGTGGTTT 1502743 Query 104977 TCACTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGG 105036 | | | || ||||||| ||| | || ||| |||| |||||||| ||||| ||| ||| Sbjct 1502744 TATCGATAGAGAAGAAGGCGATCTGGGCCCAGTTTACGGATTTCAGTGGAGGCATTTTGG 1502803 Query 105037 AGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATA 105082 ||| ||||| | ||| | || || ||||| |||||||||||| Sbjct 1502804 AGCCAAATATGTGGACATGCACACGGATTATACAGGCCAAGGTATA 1502849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658395496682560