Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq42 143 4e-29 >seq42 Length=2850585 Score = 143 bits (158), Expect = 4e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 || ||||| || | ||| | |||||||| || ||||| |||||| ||| || |||| Sbjct 2793732 TAGCAGGCCAGGAGGAAGCCTCCGTAGGTGCCGGTTCTTTTTCCCTTGCCGATGTAGCCA 2793673 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 ||||| |||| | ||||||||||| | ||| ||||||| |||||| ||||| ||||| Sbjct 2793672 CCGATTGCCACAACGTCCAGAGTGTCACCCACACCTTCCAGGTAATCCTTCTTAAGTTTC 2793613 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 | |||| ||| || |||||||| ||||||||||| || | | | ||||| || |||| | Sbjct 2793612 AACCAGTTTCGCGACCTCTTGGCTATCTCGTAGGTAGCATCTTCCTCCAGAGTTTTGACC 2793553 Query 197269 ATCAATCCCTCGCA 197282 || | || ||||| Sbjct 2793552 ATGAGACCTTCGCA 2793539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676721682263680