Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq38 98.7 2e-15 >seq38 Length=2292016 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||||| ||| || || ||||| |||| | ||| | ||||||||||||| ||| || Sbjct 756936 CTTGAGCAGCTTAACCTTGTCCTCGAGCCTGGAGATCCTCTCCAGTTTGCGCCTGCGACA 756877 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||| |||| |||||||| | ||||| | || ||| || | |||||| Sbjct 756876 CTTGGAGGCAGCCACGCGGTTCCTCTGCCTCTTCCTCTCGAGCTTTATCCTCTCCTGGCT 756817 Query 241609 CTCCATGTCGATCGGAGACTTGGG 241632 |||||||||||| || ||| |||| Sbjct 756816 CTCCATGTCGATGGGCGACATGGG 756793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521901066240