Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq116 86.0 3e-12 >seq116 Length=4125705 Score = 86.0 bits (94), Expect = 3e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 25999 ATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGC 26058 ||| ||||| || |||| || ||||| ||||| | ||||||||||| ||||| || || Sbjct 2592671 ATTTTTTTTGAGTTCTAGAAATTCAAAGATATCGGCATGCCATGGTTCCAAATACATTGC 2592730 Query 26059 AAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 |||| |||| |||||| ||||||||||| || || | ||||| | ||| | || Sbjct 2592731 AAAAGCACCTGGTCTTTTATTACCACCTTGATCGACATAACGAGCAGTATTATTATATAC 2592790 Query 26119 TTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA-ATCTTGGATCCTG 26177 | ||| || || || ||| | || ||| || |||| ||| || | | |||| Sbjct 2592791 ACGAATCATGGGTACCAAACCATTAGATTCTCCATTAGTGC-CTGATATTCTAGTTCCTT 2592849 Query 26178 TCGATCTAATA 26188 ||| ||||||| Sbjct 2592850 TCGCTCTAATA 2592860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037113446200