Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 7e-12 >seq38 Length=2292016 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 64987 TTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAA 65046 |||||| | ||||| ||| | |||||| | | ||||| || || |||||| | || Sbjct 219049 TTATTTAATGCCATTGAAAACCTTCCATGTGTCGCTAAGAAAGCAAACTGGGCACTAAAT 219108 Query 65047 TGGTTTGA-CACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGA 65105 ||| || | || || | || | || | ||||| || | || ||||| ||| || Sbjct 219109 TGGATTAATCATGAATCCGCGA-CATTTGGGGAGCGTGTTGTGGCCTTTGCTGCTGTAGA 219167 Query 65106 GGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCA 65164 |||||| ||||| | || || ||| ||||||| |||||||| || | || |||| Sbjct 219168 GGGTATTTTCTT-TAGTGGCAGTTTTGCAGCTATTTTCTGGTTGAAAAAAAGAGGACTCA 219226 Query 65165 TGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGG 65209 |||| ||||| ||| |||||||||||||| ||||||||| Sbjct 219227 TGCCTGGCCTTACCTTTAGTAATGAACTTATTTCTAGAGATGAGG 219271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562620135680