Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq145 87.8 2e-11 >seq145 Length=2710478 Score = 87.8 bits (96), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || ||||| || ||| | ||| | || |||||||| ||||| || | | |||||| Sbjct 36204 GCAAGTTCACCAGGCAACAACAGCCTTACAGCGGTCTGAATCTCCCGAGAGGTGATCGTA 36145 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| | || || | ||| ||||||| | ||||| |||| |||||| Sbjct 36144 GATCGCTTGTTGTAATGAGCTAAACGAGAAGCCTCGGCTGCAATGCGTTCGAAGATGTCG 36085 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| |||||||| ||| | |||| |||| | ||| ||||| || || Sbjct 36084 TTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAAACGCCAGTATCGGGATGAACT 36025 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 || || | |||||||||||| Sbjct 36024 TGTTTCAAAACCTTGTAGATG 36004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107062387456712