Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq145 98.7 2e-14 >seq145 Length=2710478 Score = 98.7 bits (108), Expect = 2e-14 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || |||||||| || || || ||||| |||||||||| | || ||||| || ||| Sbjct 36246 TATTTGGTGACAGCTTTCGTCCCCTCACTGACGGCGTGCTTTGCAAGTTCACCAGGCAAC 36187 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | ||| | || |||||||| ||||| || | | |||||| |||||||| | Sbjct 36186 AACAGCCTTACAGCGGTCTGAATCTCCCGAGAGGTGATCGTAGATCGCTTGTTGTAATGA 36127 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || | || ||||||| | ||||| |||| |||||||||||||| ||||||| Sbjct 36126 GCTAAACGAGAAGCCTCGGCTGCAATGCGTTCGAAGATGTCGTTGACAAAGCTGTTCATG 36067 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | ||| |||| | ||| ||||| || || || || | |||||||| Sbjct 36066 ATGCTCATGGCCTTGCTGGAAACGCCAGTATCGGGATGAACTTGTTTCAAAACCTTGTA 36008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916146833410904