Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05]
936 sequences; 201,220,334 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq116 132 3e-26
seq20 111 1e-19
>seq116
Length=4125705
Score = 132 bits (146), Expect = 3e-26
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || | || | |||||||||||||| ||| |||||| || ||||||||||| |
Sbjct 2789871 TTCCACCACGCAGACGCAGGACCAGGTGAAGGGTCGACTCCTTTTGGATGTTATAGTCGG 2789812
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
||| | || |||| || || ||||| ||||| ||||| |||| ||||||||| | |
Sbjct 2789811 ATAAAGTACGGCCATCCTCTAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGGTCTGGTG 2789752
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926
| | || |||||||| | || || || || || || |||| || |||||
Sbjct 2789751 GGATTCCTTCCTTGTCTTGGATCTTCGCCTTTAC--ATTCTCGATCGTGTCGGAAGCCTC 2789694
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || | ||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct 2789693 GACTTCCAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACAAAAATCTGCAT 2789643
Score = 122 bits (134), Expect = 6e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || | || | |||||||||||||| ||| ||||||||| ||||| ||||| |
Sbjct 2789643 TTCCACCGCGCAGACGCAGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 2789584
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| || |||| |||| || || ||||| ||||| ||||| |||| ||||| ||| | |
Sbjct 2789583 ACAGAGTGCGGCCATCCTCTAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGATCTGGTG 2789524
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||||||||| | || ||| || ||| | || | || |||||||
Sbjct 2789523 GAATTCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCGATGGTATCGGAAGCCTCGA 2789464
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| |||||||| || || |||||||| ||
Sbjct 2789463 CTTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTAAC 2789427
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| ||||||||||| ||||| || || | || |||| |||| ||| ||||| |||||
Sbjct 2790746 CTCTTTCTGAATGTTGTAGTCTGAAAGCGTTCGACCATCCTCCAATTGTTTTCCAGCGAA 2790687
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| | | ||||||||| |||| | ||| ||||| || | ||||| ||| |||
Sbjct 2790686 GATTAACCTCTGCTGGTCTGGCGGGATCCCTTCCTTATCCTGAATTTTGGCTTTAACGTT 2790627
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | || || || || || | |||||| ||||| ||||| ||||| || ||
Sbjct 2790626 TTCGATGGTGTCCGATGCTTCCACCTCCAAGGTTATCGTCTTGCCCGTAAGGGTTTTGAC 2790567
Query 34966 AAAGATCTGCAT 34977
||| ||||||||
Sbjct 2790566 AAAAATCTGCAT 2790555
Score = 107 bits (118), Expect = 1e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||||| ||| ||||||||| ||||| || || || | | || | ||
Sbjct 2789416 CAGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTC 2789357
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||||||||| ||||||||||||| | ||||| || | || | |||||||| ||
Sbjct 2789356 CTCCAGTTGCTTGCCGGCGAAGATCAACCTCTGCTGATCGGGTGGAATTCCCTCCTTATC 2789297
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || || || | | || | || |||||||| || | ||| |||||
Sbjct 2789296 TTGAATCTTCACCTTTACATTTTCAATAGTGTCGGAAGCCTCGACCTCGAGGGTAATGGT 2789237
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| || || | ||||| ||||| |||||||||
Sbjct 2789236 CTTCCCAGTCAATGTCTTGACAAAAATCTGCATG 2789203
Score = 105 bits (116), Expect = 4e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806
||| ||||||| | | || || | || | |||| ||||||||| ||||| || ||
Sbjct 2791013 ATTGCCTCCCCGAAGGCGAAGTACTAAATGTAGGGTGGACTCCTTCTGGATGTTGTAATC 2790954
Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866
|||| |||| |||| || ||||| || || |||||||| ||||| || ||||| |
Sbjct 2790953 GGATAATGTGCGTCCATCCTCGAGTTGTTTCCCAGCGAAGATGAGTCGCTGTTGGTCCGG 2790894
Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926
|| | || ||||| || | ||||| || ||| | |||| || |||||
Sbjct 2790893 GGGAATTCCTTCCTTATCTTGAATTTTGACCTTTACGTTCTCGATCGTGTCCGACGCCTC 2790834
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 2790833 GACTTCCAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 2790783
Score = 98.7 bits (108), Expect = 6e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || | | ||| ||||| | ||||| || ||| || |||||||| || || |
Sbjct 2790099 TTCCACCTCGAAGCCTGAGGACTAAGTGAAGCGTTGACTCTTTTTGAATGTTGTAATCAG 2790040
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
||| |||| |||| || | ||||| ||||||||||||| | ||| || ||| | |
Sbjct 2790039 ATAATGTGCGACCATCTTCTAACTGCTTGCCGGCGAAGATCAACCTTTGTTGATCTGGGG 2789980
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | || || ||||| | || || || ||| | | || | || ||||| |
Sbjct 2789979 GAATTCCTTCTTTGTCCTGAATCTTGGCCTTAACGTTTTCAATTGTGTCGGATGCCTCCA 2789920
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||||||| || || |||||||| ||||||||||||||
Sbjct 2789919 CCTCCAATGTAATGGTCTTGCCTGTAAGGGTCTTAACAAAGATCTGCAT 2789871
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| ||||| ||||| || || || |||| |||| || | |||||| || ||||||
Sbjct 2790289 TCCTTTTGAATATTATAATCAGACAGCGTGCGACCATCTTCTAATTGCTTGCCAGCGAAG 2790230
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || |||||||| | || | || |||||||| | || || ||| |||
Sbjct 2790229 ATCAATCTCTGCTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTAGCTTTAACGTTC 2790170
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || || ||||| || | || |||||||| || || || ||||| |||
Sbjct 2790169 TCAATGGTATCGGATGCTTCGACCTCCAAAGTGATGGTCTTACCTGTAAGAGTCTTAACA 2790110
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 2790109 AAGATCTGCAT 2790099
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||||||||| || ||||| || ||| | || ||||
Sbjct 2790538 AGGACGAGATGCAGAGTGGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGGCCATCT 2790479
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| | || ||||| || | || | || || || ||
Sbjct 2790478 TCGAGTTGCTTGCCAGCAAAGATTAATCTCTGCTGATCCGGAGGAATGCCTTCTTTATCC 2790419
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||||| | | |||| || ||||| || || | ||| || ||
Sbjct 2790418 TGAATCTTAGTTTTGACGTTTTCAATCGTGTCGGACGCCTCCACTTCTAAGGTGATTGTT 2790359
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||| || || || ||||||||||||
Sbjct 2790358 TTGCCAGTGAGCGTTTTAACGAAGATCTGCATG 2790326
>seq20
Length=2461668
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849
||||| ||||||||||| || || | | |||| |||| |||||||| ||||||||
Sbjct 1189125 TTCTGGATGTTATAGTCAGAAAGCGTCCTGCCATCTTCCAACTGCTTTCCAGCGAAGATG 1189066
Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909
|| || ||||| || | || | ||||||||||| | || || ||||||| |
Sbjct 1189065 AGACGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGTTCTCG 1189006
Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969
|| | || ||||| || || | ||| |||||||| || || |||||||| || |||
Sbjct 1189005 ATGGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCTGTTAGGGTCTTCACGAAG 1188946
Query 34970 ATCTGCATGAT 34980
|||||||||||
Sbjct 1188945 ATCTGCATGAT 1188935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325689084659384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |