Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq115 86.0 8e-12 >seq115 Length=505698 Score = 86.0 bits (94), Expect = 8e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGG 201625 || || ||| ||||||||||||||||| |||| || |||| ||||| ||||| ||||| Sbjct 406063 CGCATTCCACAAATTGGAGATAAATTTGCTTCTCGACATGG-ACAAAAGGGAACATGTGG 406005 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTAT 201685 ||| ||| |||||| || ||||| || | |||| | || || || || || Sbjct 406004 TATTCAGTATAGACAAGAGGACATGCCATTCTCGTGCGAGGGTCTTACTCCTGACATAAT 405945 Query 201686 AATCAATCCAAATTGTATACCATCAAGAATGACCAT 201721 ||||||||| || ||| ||||| ||||||| || Sbjct 405944 TATCAATCCACATGCTATTCCATCTCGAATGACAAT 405909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655272333224000