Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq116 95.1 1e-14 >seq116 Length=4125705 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 137181 ATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC 137240 || |||||| || | || | |||||||| | || || || || || ||||||||||| Sbjct 2791013 ATTGCCTCCCCGAAGGCGAAGTACTAAATGTAGGGTGGACTCCTTCTGGATGTTGTAATC 2790954 Query 137241 GCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGG 137299 | | ||||| || | || ||||||||||| ||||| |||| || || || || || | Sbjct 2790953 GGATAATGTGCGTCCA-TCCTCGAGTTGTTTCCCAGCGAAGATGAGTCGCTGTTGGTCCG 2790895 Query 137300 GAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTT 137359 | || || ||||| || || |||||| |||| | || | |||||| | | | Sbjct 2790894 GGGGAATTCCTTCCTTATCTTGAATTTTGACCTTTACGTTCTCGATCGTGTCCGACGCCT 2790835 Query 137360 CTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 | ||||| | ||| | || || ||||| | || || ||||| || |||||| || Sbjct 2790834 CGACTTCCAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACGAAGATCTGCATACCT 2790779 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||||||||| || |||||| |||| | | |||||||| ||||| ||||||||||| Sbjct 2790481 TCTTCGAGTTGCTTGCCAGCAAAGATTAATCTCTGCTGATCCGGAGGAATGCCTTCTTTA 2790422 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || ||| | | ||| | |||||| | | || ||||| | || | Sbjct 2790421 TCCTGAATCTTAGTTTTGACGTTTTCAATCGTGTCGGACGCCTCCACTTCTAAGGTGATT 2790362 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || ||||| || | ||||| ||||| || ||||| Sbjct 2790361 GTTTTGCCAGTGAGCGTTTTAACGAAGATCTGCAT 2790327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488538284035200