Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq116 123 2e-23 >seq116 Length=4125705 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||| ||||||||| | |||||| ||||||||| || || || | | Sbjct 2790520 GACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGGCCATCTTCGAGTTGCTTGCCAGCA 2790461 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||||| | ||| ||||| ||||| |||||||||||||| ||| || ||| | Sbjct 2790460 AAGATTAATCTCTGCTGATCCGGAGGAATGCCTTCTTTATCCTGAATCTTAGTTTTGACG 2790401 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || |||| || ||||||||| | || | ||||| ||||| || ||||| Sbjct 2790400 TTTTCAATCGTGTCGGACGCCTCCACTTCTAAGGTGATTGTTTTGCCAGTGAGCGTTTTA 2790341 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| ||||||||| || Sbjct 2790340 ACGAAGATCTGCATGCCT 2790323 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | |||||||||| |||||||||||||| | || || ||| || Sbjct 2790764 AACCAAATGAAGCATTGACTCTTTCTGAATGTTGTAGTCTGAAAGCGTTCGACCATCCTC 2790705 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||| || | |||||| | ||| || ||||| || || ||||| ||||| Sbjct 2790704 CAATTGTTTTCCAGCGAAGATTAACCTCTGCTGGTCTGGCGGGATCCCTTCCTTATCCTG 2790645 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | ||| | || || | | ||||| || | || | ||| || Sbjct 2790644 AATTTTGGCTTTAACGTTTTCGATGGTGTCCGATGCTTCCACCTCCAAGGTTATCGTCTT 2790585 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||||||||||| Sbjct 2790584 GCCCGTAAGGGTTTTGACAAAAATCTGCAT 2790555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605623648960