Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05]
936 sequences; 201,220,334 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq116 136 4e-27
seq20 82.4 8e-11
>seq116
Length=4125705
Score = 136 bits (150), Expect = 4e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | ||||| || || ||||| ||||| ||||| ||||||||| | ||| |
Sbjct 2790544 AGTCGAAGGACGAGATGCAGAGTGGACTCCTTCTGAATATTGTAGTCGGAGAGGGTACGG 2790485
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| ||||| || ||||| ||||| || || | ||||||||| || || |||||||||
Sbjct 2790484 CCATCTTCGAGTTGCTTGCCAGCAAAGATTAATCTCTGCTGATCCGGAGGAATGCCTTCT 2790425
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || |||||| | | |||| |||||||||| ||||| || | ||
Sbjct 2790424 TTATCCTGAATCTTAGTTTTGAC-GTTTTCAATCGTGTCGGACGCCTCCACTTCTAAGGT 2790366
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || | ||||||||||| || |||||
Sbjct 2790365 GATTGTTTTGCCAGTGAGCGTTTTAACGAAGATCTGCAT 2790327
Score = 105 bits (116), Expect = 7e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || ||||| || || || ||||| || |||||||| ||| | || |
Sbjct 2789421 AGACGCAGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGT 2789362
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || || || ||||| || || ||||| | |||||||||||| || || || ||
Sbjct 2789361 CCGTCCTCCAGTTGCTTGCCGGCGAAGATCAACCTCTGCTGATCGGGTGGAATTCCCTCC 2789302
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || || || || | |||||||| | || || ||||| |||
Sbjct 2789301 TTATCTTGAATCTTCACCTTTACATTTTCAATAGTGTCGGAAGCCTCGACCTCGAGGGTA 2789242
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| || || || || || || || ||||| ||||| ||
Sbjct 2789241 ATGGTCTTCCCAGTCAATGTCTTGACAAAAATCTGCATGTT 2789201
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
||||| | ||||||| || | || || || |||||||||||||| || || || | |
Sbjct 2790325 CCTCCACGAAGTCGCAGGACTAAATGCAGAGTAGATTCCTTTTGAATATTATAATCAGAC 2790266
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | ||| || || || | || ||||| || || ||||| | |||||| ||||| ||
Sbjct 2790265 AGC-GTGCGACCATCTTCTAATTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCGGGTGG 2790207
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || || || ||| || || | || ||||| | ||| ||
Sbjct 2790206 GATTCCTTCCTTGTCCTGGATCTTAGCTTTAACGTTCTCAATGGTATCGGATGCTTCGAC 2790147
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| | ||| ||||| ||||| || | ||| ||||| || || ||||||
Sbjct 2790146 CTCCAAAGTGATGGTCTTACCTGTAAGAGTCTTAACAAAGATCTGCATT 2790098
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
||||| ||||| ||||| || |||||||| ||| | ||| | || ||||| |||
Sbjct 2790985 TGTAGGGTGGACTCCTTCTGGATGTTGTAATCGGATAATGTGCGTCCATCCTCGAGTTGT 2790926
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || || || | ||||| || || || || || ||||| || |||||||||||
Sbjct 2790925 TTCCCAGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATTCCTTCCTTATCTTGAATTTTG 2790866
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || | ||||| |||| || || || ||||| |||||||| |||||
Sbjct 2790865 ACCTTTACGTTCTCGATCGTGTCCGACGCCTCGACTTCCAGAGTGATGGTTTTCCCGGTG 2790806
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| || |||||
Sbjct 2790805 AGGGTCTTCACGAAGATCTGCAT 2790783
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| ||||| || || |||||||||||||| || | ||| || || || | |||
Sbjct 2790074 GTGAAGCGTTGACTCTTTTTGAATGTTGTAATCAGATAATGTGCGACCATCTTCTAACTG 2790015
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || ||||| | || ||||| || || || |||||||| || ||||| ||
Sbjct 2790014 CTTGCCGGCGAAGATCAACCTTTGTTGATCTGGGGGAATTCCTTCTTTGTCCTGAATCTT 2789955
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || || | ||||||||| | ||||| || | |||||||| || || ||
Sbjct 2789954 GGCCTTAACGTTTTCAATTGTGTCGGATGCCTCCACCTCCAATGTAATGGTCTTGCCTGT 2789895
Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714
| || ||||| || || ||||||
Sbjct 2789894 AAGGGTCTTAACAAAGATCTGCATT 2789870
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | || |||| || ||||| || || || ||||| || ||||||||||||
Sbjct 2789643 TTCCACCGCGCAGACGCAGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 2789584
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| ||| | || || ||||| ||||| ||||| || | | ||||||||| || |
Sbjct 2789583 ACAGAGTGCGGCCATCCTCTAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGATCTGGTG 2789524
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || || || || || ||||| ||| || || || | || ||||| | || |
Sbjct 2789523 GAATTCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCGATGGTATCGGAAGCCTCGA 2789464
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| || || || ||||| || ||||| | || |||||||
Sbjct 2789463 CTTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTAACGA 2789425
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||||| | || | || ||| | || || || |||||||||||||| |
Sbjct 2790781 CCTCCACGAAGTCGAAGAACCAAATGAAGCATTGACTCTTTCTGAATGTTGTAGTCTGAA 2790722
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || | ||||| || || || || || | |||||| || |||||
Sbjct 2790721 AGCGTTCGACCATCCTCCAATTGTTTTCCAGCGAAGATTAACCTCTGCTGGTCTGGCGGG 2790662
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || |||||||| ||| || || | ||||| || | ||||||
Sbjct 2790661 ATCCCTTCCTTATCCTGAATTTTGGCTTTAACGTTTTCGATGGTGTCCGATGCTTCCACC 2790602
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || || || || || || | ||||| || ||||| |||||
Sbjct 2790601 TCCAAGGTTATCGTCTTGCCCGTAAGGGTTTTGACAAAAATCTGCAT 2790555
>seq20
Length=2461668
Score = 82.4 bits (90), Expect = 8e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || | ||| || || || || || | |||||||||||| || || ||||| || ||
Sbjct 1189092 TCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCCTCCTTG 1189033
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|| || || || |||||| || | || ||||||| ||||| ||||| || |||
Sbjct 1189032 TCCTGGATCTTAGCTTTGACGTTCTCGATGGTATCGGACGCCTCCACCTCGAGGGTGATG 1188973
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || |||| || || ||||| || |||||
Sbjct 1188972 GTCTTGCCTGTTAGGGTCTTCACGAAGATCTGCAT 1188938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505392486838720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |