Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq25 89.7 6e-13 >seq25 Length=4911174 Score = 89.7 bits (98), Expect = 6e-13 Identities = 177/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 181805 GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTT 181864 |||||||||||| || | |||||| ||||||||| || | ||| | || ||||| Sbjct 1973815 GTCTTTACCACCACAAAGCCTCGTACCGAATTGACCATTGGGTTGAAGCAAATTTATGTT 1973756 Query 181865 GTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTCACC 181924 ||| ||| ||| | || || |||| |||||| || |||||||||||| || Sbjct 1973755 GTTGCTACCGACGAAGTTTTGTGCTAAATTAATGATGGTTGCCATAAGGGACACTTCGCC 1973696 Query 181925 GTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATC 181984 ||||| || || || | || ||||| | | | | ||| || ||||| | |||| Sbjct 1973695 ATGGTGATACGCGGAATGTTCGGCAACTGAACCAGATAGCTGCGCTACCTTGACTTCACG 1973636 Query 181985 TTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044 |||| || | ||||| | ||||| ||||| ||||| ||| |||| ||| || Sbjct 1973635 TTTGTCATTACGCTTAAAGCACGTGTACATTACTTTTCTCTGACCAGGTTTGAAACCGTC 1973576 Query 182045 CGCCATATGGGCAATAGAGCGC 182066 | ||| | || ||| || ||| Sbjct 1973575 CATCATGTTGGGAATGGATCGC 1973554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024652025600