Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq23 399 7e-106 seq116 178 4e-39 seq4 125 2e-23 seq3 84.2 7e-11 >seq23 Length=3064571 Score = 399 bits (442), Expect = 7e-106 Identities = 1015/1529 (66%), Gaps = 34/1529 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | ||||| ||||| || || || |||||||| |||| |||||||| | | | Sbjct 1526620 GCTGTGGGAATAGATTTGGGAACGACGTATTCTTGCGTTGGAGTTTGGCAGCAAGGTAAG 1526561 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||||||||| || |||||||| || ||||| || || || || ||||||||| Sbjct 1526560 GTGGAAATAATTGCTAACGATCAAGGGAATAGAACCACCCCGAGTTATGTGGCATTTACC 1526501 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || || | || || ||| |||| ||||| |||| |||| || || |||| Sbjct 1526500 GACACCGAACGCCTCATCGGAGATGCTGCGAAAAACCAAGTTGCTATGAACCCTGCAAAT 1526441 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || |||||||| || | || || ||| ||| |||| || | ||| Sbjct 1526440 ACTGTCTTCGATGCTAAACGTTTGATCGGAAGACGTTACGATGACCAAAAGATTCAAGAC 1526381 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| |||| || | ||||||| || || || || || | ||||||| || ||| Sbjct 1526380 GATATAAAGCACTGGCCTTTTAAGGTAGT---GAACGATGGAGGGAAACCAAAGATAGAG 1526324 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 || || | ||||||| || |||| ||||| || || || |||||| | Sbjct 1526323 GTAGAGTTCCGAGGTGAAATCAAGAAATTCAATCCCGAGGAGATCAGTTCCATGGTTCT- 1526265 Query 349559 GTTAAA-ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||| |||| || || |||||||| || | || | | ||| || || ||||| || Sbjct 1526264 GTCAAAGATGAGAGAGATCGCTGAAGCCTACCTGGGGAAGAAAGTCACCGAAGCTGTGAT 1526205 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||| || || || || ||||||||| ||||||| || || || |||||||| | || Sbjct 1526204 TACAGTTCCGGCTTACTTTAATGATTCCCAGCGACAAGCTACTAAGGATGCTGGTACTAT 1526145 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | || || || || || ||||| || || || ||||| || |||| ||||| Sbjct 1526144 TGCTGGTCTTAACGTCCTTAGGATTATTAACGAGCCAACCGCTGCTGCTCTTGCCTATGG 1526085 Query 349738 GCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 |||||||||| ||| | ||||| ||| | | ||||||||||| ||||| || Sbjct 1526084 ACTTGATAAAAATTTGA---AAGGAGAAAGAAACGTCTTGATTTTTGATTTGGGTGGAGG 1526028 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAGTTAAAGCAAC 349851 ||||||||||| || | ||| | | || || || | |||||||||| ||| | || Sbjct 1526027 CACTTTTGATGTTTCTATTCTATCGATAGACGAAGGTTCACTTTTTGAAGTGAAATCTAC 1525968 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 |||||| ||||| ||| | |||||||| || ||||| || || | || ||||||| Sbjct 1525967 TGCTGGAGATACTCATTTGGGTGGAGAGGACTTTGACAACCGATTGGTAGAGCATTTTTC 1525908 Query 349912 TAAAGAATTTAAGCGTCAAGCTAAAATTGATATTG-GAGATAATCCTAGAGCAATGCGTC 349970 | ||||||| | | || || | || ||| || ||||| |||| || || Sbjct 1525907 AAGAGAATTTGAAAGGAAATACAAGA-AGAACTTGAGAACCAATCCACGAGCGATTCGCA 1525849 Query 349971 GCCTAAGAACT-GCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 | |||||||| ||| ||||||||| || || | || || || | ||| | | || Sbjct 1525848 GATTAAGAACTAGCG-CTGAACGTGCAAAACGCACGTTGTCTTCCAGTACTGAGGCATCA 1525790 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 | || || || || | || || | ||||| | | | || | | || | Sbjct 1525789 TTGGAGATCGACGCTTTGTACGAGGGTATCGATTTTTATACTAAAATCTCCAGAGCCAGA 1525730 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 ||||| || |||||| |||||||| | | || | || || || || || | |||| Sbjct 1525729 TTTGAGGAGTTATGTGCCGATCTTTTCCGCTCTACTCTTGAACCAGTTGAGAAGGCATTA 1525670 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 | ||||| || || ||||| ||| |||| | || | ||||| ||||| || Sbjct 1525669 ACCGATGCCAAGTTGGATAAAAAATCCATTCATGATATCGTACTGGTTGGAGGTTCCACT 1525610 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTAT--CTGAGTTTTTTAATGGCAAAGAACCT---T 350264 || ||||| ||| | |||| || | | | ||| || | |||| | || | Sbjct 1525609 CGAATTCCCAAAAT---CCAGTCTCTCTTGCAAAATTTCTTCTGTGGAAAGCAACTGAAT 1525553 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT-T 350323 || || |||||||| || || |||||||| ||||| || || || || || |||| Sbjct 1525552 CT--TTCGATTAATCCTGACGAGGCTGTTGCTTATGGCGCCGCCGTCCAAGCTGCTATCC 1525495 Query 350324 TTATC-----TGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTC 350378 ||| | |||| | ||| || | | | ||| | | | | ||||| |||| Sbjct 1525494 TTACCGGGGAAGGAAGCACGAGCGCTGCATTGCAGGATGTTCTTTTGGTGGATGTCACTC 1525435 Query 350379 CACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATA 350438 ||||||| | || | |||||| |||||| || ||||| | ||| | ||| Sbjct 1525434 CACTTTCTTTGGGCATTGAAACTGCTGGTGGGGTTATGACCAACATCATTGAACGCAATG 1525375 Query 350439 GTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGG 350498 | | ||| || || | ||||| ||| | |||||||| || |||||||| || | Sbjct 1525374 CTCGCATTCCTTGTAAGCAGACTCAAACGTTTACAACATTTGCTGACAATCAGCCTGCTG 1525315 Query 350499 TAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAG 350558 | |||||||||||||| || || ||||| || || ||||| || || || ||| Sbjct 1525314 TTACAATTCAAGTATTCGAGGGCGAACGAGCAATGACCAAAGACAACAACTTGCTGGGAA 1525255 Query 350559 AATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTT 350618 |||| ||| || |||| | ||| || ||||| ||||| ||||||||||| | | Sbjct 1525254 CATTTGAGTTAACTGGAATTGCTCCAGCACCAAGAGGTGTTCCAAAGATTGAAGTCACAT 1525195 Query 350619 TCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAA 350678 | ||| | ||| | ||||| ||| | |||| || || || | ||||||| | Sbjct 1525194 TTGATTTGGATGCCAATGGAATTCTGCATGTCACAGCCAAGGATACTGCAAGTGGGCGTA 1525135 Query 350679 GTAGTAAGGTAGAAATTACTAATGATAAA 350707 |||| | ||| ||| ||||| ||||| Sbjct 1525134 GTAGCGATGTAAGAATCACTAACAATAAA 1525106 Score = 206 bits (228), Expect = 8e-48 Identities = 593/892 (66%), Gaps = 29/892 (3%) Strand=Plus/Plus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 |||| | ||| ||||| | || | |||||||| |||||||||| ||||||||||| | Sbjct 1525164 ACATGCAGAATTCCATTGGCATCCAAATCAAATGTGACTTCAATCTTTGGAACACCTCTT 1525223 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || ||| | |||||||||||| |||| || | || || ||||| || || Sbjct 1525224 GGTGCTGGAGCAATTCCAGTTAACTCAAATGTTCCCAGCAAGTTGTTGTCTTTGGTCATT 1525283 Query 183039 GCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 |||| ||||| || |||||||||| ||||| || |||||||| ||| | | || | | Sbjct 1525284 GCTCGTTCGCCCTCGAATACTTGAATTGTAACAGCAGGCTGATTGTCAGCAAATGTTGTA 1525343 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACT 183158 || ||| | | ||| |||||| | ||| || || || ||||| || Sbjct 1525344 AACGTTTGAGTCTGCTTACAAGGAATGCGAGCATTGCGTTCAATGATGTTGGTCATAACC 1525403 Query 183159 TCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATC-TG- 183216 | | |||||||| | || || || | ||| | ||||| | || | | ||| || Sbjct 1525404 CCACCAGCAGTTTCAATGCCCAAAGAAAGTGGAGTGACATCCACCAAAAGAACATCCTGC 1525463 Query 183217 -ATGTTTTA-TC-TGATTTAATATCACTTAAA-ATTGCAGCTTGAACAGCTGCACCATAT 183272 ||| || || || | | ||| || |||||||| || || || ||||| Sbjct 1525464 AATGCAGCGCTCGTGCTTCCTTCCCCGGTAAGGATAGCAGCTTGGACGGCGGCGCCATAA 1525523 Query 183273 GCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAA-AAATTCTGA 183331 |||||||| || || || ||||| ||| || | || || ||| || ||||| || Sbjct 1525524 GCAACAGCCTCGTCAGGATTAATCGAAAGATTCAGTTGCTTTCCACAGAAGAAATTTTGC 1525583 Query 183332 AAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGAT 183391 ||| | || ||||| ||||||| ||| ||||| || || | ||| | |||| || Sbjct 1525584 AAG-AGAGACTGGATTTTGGGAATTCGAGTGGAACCTCCAACCAGTACGATATCATGAAT 1525642 Query 183392 --ATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTT 183448 ||| ||||| | || ||| | ||| |||| | || ||||| || || | ||| Sbjct 1525643 GGATT--TTTTATCCAACTTG-GCATCGGTTAATGCCTTCTCAACTGGTTCAAGAGTAGA 1525699 Query 183449 TCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGAT----Gaaaaaa 183504 | || | ||| ||||||||| || ||||| ||||| | |||| | | ||| Sbjct 1525700 GCGGAAAAGATCGGCACATAACTCCTCAAATCTGGCTCTGG----AGATTTTAGTATAAA 1525755 Query 183505 aGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATG 183564 | || ||||| | || || | || || || | |||| | ||| || || || | Sbjct 1525756 AATCGATACCCTCGTACAAAGCGTCGATCTCCAATGATGCCTCAGTACTGGAAGACAACG 1525815 Query 183565 TTCTTTTAGCTCGTTCACATGCT-GTTCTTAGTCGACGTAATGATCTTGGATTATCTGT- 183622 | | ||| || |||||| ||| ||||||| || || | | || |||||| | | Sbjct 1525816 TGCGTTTTGCACGTTCAGC-GCTAGTTCTTAATCTGCGAATCGCTCGTGGATTGGTTCTC 1525874 Query 183623 AATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATC 183682 || |||| || | ||| |||| |||||| | |||||| | | |||| | || Sbjct 1525875 AAGTTCTTCTTG-TATTTCCTTTCAAATTCTCTTGAAAAATGCTCTACCAATCGGTTGTC 1525933 Query 183683 AAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATT---CC 183739 ||| || || ||||| ||||| ||||| |||||||||| ||| |||||||| | | || Sbjct 1525934 AAAGTCCTCTCCACCCAAATGAGTATCTCCAGCAGTAGATTTCACTTCAAAAAGTGAACC 1525993 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 || || || || ||| || |||||||| || || ||||||||||||||| Sbjct 1525994 TTCGTCTATCGATAGAATAGAAACATCAAAAGTGCCTCCACCCAAATCAAAA 1526045 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || |||||||| ||||| || ||||| ||||| || || | |||||| | |||||| ||| Sbjct 1521584 CCCTCTTTATCTTGAATCTTTGCTTTGACATTTTCGATGGTATCAGAGGCTTCAACCTCA 1521643 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||| ||||| || |||| || ||||||||||||||||| Sbjct 1521644 AGGGTAATGGTCTTCCCCGTTAAAGTCTTTACAAAAATCTGCAT 1521687 Score = 86.0 bits (94), Expect = 2e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || ||||| ||||| ||||| ||||| || || |||| ||||| ||||| || || ||| Sbjct 1521412 GTTGACTCCTTTTGGATATTGTAATCCGACAAAGTTCTTCCATCCTCAAGCTGCTTACCA 1521471 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTT 140637 ||||| |||| | ||||||||||| ||||| |||| Sbjct 1521472 GCAAAAATTAACCTCTGCTGATCAGGTGGAATGCCTT 1521508 >seq116 Length=4125705 Score = 178 bits (196), Expect = 4e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | || || || ||||| ||||| ||||| || |||||||| || || Sbjct 2790557 CATCCCACCACGAAGTCGAAGGACGAGATGCAGAGTGGACTCCTTCTGAATATTGTAGTC 2790498 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| ||||| || ||||||||||||| | |||||||| || Sbjct 2790497 GGAGAGGGTACGGCCATCTTCGAGTTGCTTGCCAGCAAAGATTAATCTCTGCTGATCCGG 2790438 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||||||||||||||| |||| ||| || || ||||||| || || | || Sbjct 2790437 AGGAATGCCTTCTTTATCCTGAATCTTAGTTTTGACGTTTTCAATCGTGTCGGACGCCTC 2790378 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | || | ||| || || || || ||||| || || |||||||| Sbjct 2790377 CACTTCTAAGGTGATTGTTTTGCCAGTGAGCGTTTTAACGAAGATCTGCAT 2790327 Score = 167 bits (184), Expect = 7e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | || || || | ||||| || |||||||||||||| || ||||| Sbjct 2790101 CATTCCACCTCGAAGCCTGAGGACTAAGTGAAGCGTTGACTCTTTTTGAATGTTGTAATC 2790042 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||||||| || |||||||| | || || || || ||||| | | ||| ||||| || Sbjct 2790041 AGATAATGTGCGACCATCTTCTAACTGCTTGCCGGCGAAGATCAACCTTTGTTGATCTGG 2789982 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||||||||| |||||||| || || || || || ||||| | || |||| || Sbjct 2789981 GGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTAACGTTTTCAATTGTGTCGGATGCCTC 2789922 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | ||||| ||||| || || || || || ||||| ||||||||| Sbjct 2789921 CACCTCCAATGTAATGGTCTTGCCTGTAAGGGTCTTAACAAAGATCTGCATT 2789870 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | || ||||| | |||||| | |||||||| ||||| || || || Sbjct 2790785 CATACCTCCACGAAGTCGAAGAACCAAATGAAGCATTGACTCTTTCTGAATGTTGTAGTC 2790726 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| ||||| || | |||||||||||| ||||||| | ||||| || || Sbjct 2790725 TGAAAGCGTTCGACCATCCTCCAATTGTTTTCCAGCGAAGATTAACCTCTGCTGGTCTGG 2790666 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| |||||||||||||| ||||| || || || || | || |||| ||| Sbjct 2790665 CGGGATCCCTTCCTTATCCTGAATTTTGGCTTTAACGTTTTCGATGGTGTCCGATGCTTC 2790606 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||| || || || ||||| |||||||||||||| Sbjct 2790605 CACCTCCAAGGTTATCGTCTTGCCCGTAAGGGTTTTGACAAAAATCTGCAT 2790555 Score = 161 bits (178), Expect = 3e-34 Identities = 175/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | || || || | ||| |||||||| || ||||||||||||||||| Sbjct 2790329 CATGCCTCCACGAAGTCGCAGGACTAAATGCAGAGTAGATTCCTTTTGAATATTATAATC 2790270 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| | ||| || ||||| ||||| | | ||||| || || Sbjct 2790269 AGACAGCGTGCGACCATCTTCTAATTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCGGG 2790210 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| || ||||| || |||||||| || || ||||| | ||| |||| ||| Sbjct 2790209 TGGGATTCCTTCCTTGTCCTGGATCTTAGCTTTAACGTTCTCAATGGTATCGGATGCTTC 2790150 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || | ||||| || || || || || ||||| ||||||||| Sbjct 2790149 GACCTCCAAAGTGATGGTCTTACCTGTAAGAGTCTTAACAAAGATCTGCATT 2790098 Score = 149 bits (164), Expect = 2e-30 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || || ||||| || ||||| ||||| || ||||| || Sbjct 2789873 CATTCCACCACGCAGACGCAGGACCAGGTGAAGGGTCGACTCCTTTTGGATGTTATAGTC 2789814 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| || || ||||| || || || || || |||||||| || | ||||| || || Sbjct 2789813 GGATAAAGTACGGCCATCCTCTAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGGTCTGG 2789754 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || |||||||| || || || || || || |||||||| || |||| || || | || Sbjct 2789753 TGGGATTCCTTCCTTGTCTTGGATCTTCGCCTTTACATTCTCGATCGTGTCGGAAGCCTC 2789694 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || || | ||||| || || || || || ||||||||||||||| Sbjct 2789693 GACTTCCAGGGTGATGGTCTTGCCAGTGAGAGTCTTAACAAAAATCTGCATT 2789642 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || | ||| || || ||||| || || || || ||||| |||||||| || ||||| Sbjct 2790994 AGTACTAAATGTAGGGTGGACTCCTTCTGGATGTTGTAATCGGATAATGTGCGTCCATCC 2790935 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || |||||||| ||||| ||||| || || || || || || ||||||||||| ||||| Sbjct 2790934 TCGAGTTGTTTCCCAGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATTCCTTCCTTATCT 2790875 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 |||||||| | ||||| || || |||| || || | || ||||| || || | || Sbjct 2790874 TGAATTTTGACCTTTACGTTCTCGATCGTGTCCGACGCCTCGACTTCCAGAGTGATGGTT 2790815 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || || || |||||||| Sbjct 2790814 TTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 2790783 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || ||||| || ||||| || || || || ||||| || || || || || || Sbjct 2789415 AGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCGTCC 2789356 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| || || || ||||| | | |||||||| || |||||||| || ||||| Sbjct 2789355 TCCAGTTGCTTGCCGGCGAAGATCAACCTCTGCTGATCGGGTGGAATTCCCTCCTTATCT 2789296 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || | |||||||| ||||| | || || | || || || || |||| ||| Sbjct 2789295 TGAATCTTCACCTTTACATTTTCAATAGTGTCGGAAGCCTCGACCTCGAGGGTAATGGTC 2789236 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||| || |||||||||||||| Sbjct 2789235 TTCCCAGTCAATGTCTTGACAAAAATCTGCAT 2789204 >seq4 Length=4731202 Score = 125 bits (138), Expect = 2e-23 Identities = 289/426 (68%), Gaps = 22/426 (5%) Strand=Plus/Plus Query 349233 GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAA 349292 |||||| ||| | |||||| ||||| ||||| || ||||| || ||||| ||||||| Sbjct 3486257 GTGTTGGTGTCTACAAAAATGGGCGTGTTGAAATTATCGCAAACGACCAAGGCAACAGAA 3486316 Query 349293 CAACGCCATCATACGTTGCATTTAC---CGAAACTGAGCGTATGATTGGTGATTCTGCAA 349349 || ||||| || || |||||||| ||| || | |||| || ||| |||||| Sbjct 3486317 TTACCCCATCTTATGTGGCATTTACTGCCGATGGAGAAAGACTGATCGGAGATGCTGCAA 3486376 Query 349350 AAAATCAAGCTGCTG-CTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 | || ||| ||| | | || ||| |||| ||| | || || || ||||| || |||||| Sbjct 3486377 AGAACCAA-CTGACGACAAACCCAGAAAACACGATCTTCGACGCAAAGCGTCTCATTGGT 3486435 Query 349409 AGAAGTTTTTCTGACAA-ATC-TACACAATCTGATCTAAAACATTTTCCTTTTACTGTTG 349466 | | || |||| || | || || || | || || ||||||| ||| Sbjct 3486436 CGTGAGTGGTCGGACAGTATGGTTCAGCAT--GACGTGAAGTTCTTCCCTTTTAAGGTTA 3486493 Query 349467 TTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAA---TATAAAGGTGAACAAAAAC 349523 || ||| || | ||||||| || |||| | | | | | || ||| || Sbjct 3486494 TTGAAAAGAACAGC---AAACCAAACATCAAGGTAGCAACCTCTCAGGGAGAAAAAG--- 3486547 Query 349524 AATTTTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGA 349581 ||||||||| ||||||||||| ||||||| | ||| |||||||||| ||| || Sbjct 3486548 --TTTTTACCCCTGAAGAAATTTCTGCAATGGTGCTGAGTAAGATGAAGGAAACTGCCGA 3486605 Query 349582 AGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGA 349641 ||||| |||| | | || ||| |||| ||| | |||||||| || || ||||| || Sbjct 3486606 GGCATACCTAGGCAAGAAGGTTACTCATGCCGTTGTCACTGTACCTGCATACTTTAACGA 3486665 Query 349642 TGCCCA 349647 ||||| Sbjct 3486666 CGCCCA 3486671 Score = 113 bits (124), Expect = 1e-19 Identities = 165/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714 ||||| ||||||||||| | || | || | || || | ||||| || |||||||| Sbjct 3486759 GCAACCAAAGATGCTGGTACAATCTCTGGACTGAACGTCATGAGAATCATCAATGAACCA 3486818 Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 ||||| ||||| ||||| ||||| || ||||| || || |||||| || | || Sbjct 3486819 ACTGCAGCAGCTATTGCCTATGGTCTGGATAA---GAAAGATGGAGAAAAGAACGTCCTC 3486875 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | |||||||| || |||||||||||||| || | || || | || | ||| | Sbjct 3486876 GTCTTTGATTTGGGAGGTGGTACTTTTGACGTCAGTTTGCTCACTATCGACAATGGAGTA 3486935 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 || |||||| || || ||| || || || ||||| |||||||||||||| Sbjct 3486936 TTCGAAGTTGTTGCCACAAATGGAGACACTCACCTTGGAGGAGAAGATTTTGA 3486988 >seq3 Length=3390926 Score = 84.2 bits (92), Expect = 7e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 378211 GCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATT 378270 ||||| || || ||||| ||||||||||| | ||||||||||||||| || || Sbjct 1102916 GCTTTCATCAGACGTCGTTGTATATAACCAGTCTCTGCAGTTTTAACTGCAGTGTCGATG 1102975 Query 378271 AAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATA 378330 | || | ||||| ||||| || ||||| | ||||||| |||||| | ||| | | | Sbjct 1102976 AGGCCTTCCCGACCTCCCATGGCGTGGAAATAAAATTCAGAAGGAGTCAACCCAGCCAGA 1103035 Query 378331 AATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGT 378390 | || |||| | || ||||| | | || || ||| | || || |||| ||| Sbjct 1103036 TAAGAGTTCTCCACGAAGCCTCTGGATTCAGGACCATAATCGTCCTTGATAAAATGTGGT 1103095 Query 378391 AATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACC 378446 | || || || || ||| | || || | ||| || || |||||||| || || Sbjct 1103096 AGAGTCCGCTTACGGAATCCAAAAGGGATCCTTTTGCCCTCGACATTCTGCTGTCC 1103151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515236228311608