Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 297 2e-75
>seq1220
Length=9943
Score = 297 bits (328), Expect = 2e-75
Identities = 607/892 (68%), Gaps = 10/892 (1%)
Strand=Plus/Plus
Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722
||| || | | ||||||| || | ||| |||||| |||||||||||||| |||||
Sbjct 7158 AACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGT 7217
Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA 16781
||||| | | ||| |||||||| ||||| | | | | || |||| | ||| |
Sbjct 7218 GGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCT-A 7276
Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841
||||| | |||||| || || |||||||| ||||| || | ||| ||| ||||||||
Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336
Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901
||||||| | | || || | || || || | ||| |||||| || ||||||| |
Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396
Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCA 16961
| ||||||| | | ||| | |||||| | ||| || || ||| | |
Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATAATA 7456
Query 16962 GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCA 17021
|| || || || |||| ||||| || || | | || | ||| || || || || |
Sbjct 7457 AGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTA 7516
Query 17022 ACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGA 17081
|| ||||| ||||| || || |||||||| || | || || || || ||||
Sbjct 7517 GACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGA 7576
Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTAC 17141
| || || ||||| | || || || | ||| || || || | ||||| ||||| | |
Sbjct 7577 AAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGC 7636
Query 17142 GAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCT 17201
||||||| | | |||| | ||||||| || |||| | |||||||| || |
Sbjct 7637 TGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCAT 7696
Query 17202 TAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261
| ||||| ||||| || | ||||| | |||||||| || || || | ||||||||
Sbjct 7697 TGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACA 7756
Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTA 17321
||||| || || ||||| || || || ||||| |||||||| || |||||||| | ||
Sbjct 7757 TTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTA 7816
Query 17322 TTTGAACTTC--CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379
|||||| || || || || |||||| | |||||||| || ||||| || ||| ||
Sbjct 7817 CTTGAACCTCTTGAC-TA-AAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGC 7874
Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAACGCGC 17437
|||||||| ||||| | | || || |||| | | ||||| |||| ||| |
Sbjct 7875 AGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGT-TAA-TTTATTC 7932
Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497
|| | | || |||| | |||| ||| |||||||||| |||||||| || | ||
Sbjct 7933 CAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCT 7992
Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATC 17549
| ||| || || ||||||||| |||| ||| ||||| |||||| |||
Sbjct 7993 TGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATC 8044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517374777605400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |