Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1220 297 2e-75 >seq1220 Length=9943 Score = 297 bits (328), Expect = 2e-75 Identities = 607/892 (68%), Gaps = 10/892 (1%) Strand=Plus/Plus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 ||| || | | ||||||| || | ||| |||||| |||||||||||||| ||||| Sbjct 7158 AACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGT 7217 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA 16781 ||||| | | ||| |||||||| ||||| | | | | || |||| | ||| | Sbjct 7218 GGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCT-A 7276 Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841 ||||| | |||||| || || |||||||| ||||| || | ||| ||| |||||||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901 ||||||| | | || || | || || || | ||| |||||| || ||||||| | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCA 16961 | ||||||| | | ||| | |||||| | ||| || || ||| | | Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATAATA 7456 Query 16962 GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCA 17021 || || || || |||| ||||| || || | | || | ||| || || || || | Sbjct 7457 AGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTA 7516 Query 17022 ACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGA 17081 || ||||| ||||| || || |||||||| || | || || || || |||| Sbjct 7517 GACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGA 7576 Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTAC 17141 | || || ||||| | || || || | ||| || || || | ||||| ||||| | | Sbjct 7577 AAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGC 7636 Query 17142 GAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCT 17201 ||||||| | | |||| | ||||||| || |||| | |||||||| || | Sbjct 7637 TGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCAT 7696 Query 17202 TAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261 | ||||| ||||| || | ||||| | |||||||| || || || | |||||||| Sbjct 7697 TGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACA 7756 Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTA 17321 ||||| || || ||||| || || || ||||| |||||||| || |||||||| | || Sbjct 7757 TTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTA 7816 Query 17322 TTTGAACTTC--CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 |||||| || || || || |||||| | |||||||| || ||||| || ||| || Sbjct 7817 CTTGAACCTCTTGAC-TA-AAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGC 7874 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTGTAAGAACGCGC 17437 |||||||| ||||| | | || || |||| | | ||||| |||| ||| | Sbjct 7875 AGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGT-TAA-TTTATTC 7932 Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497 || | | || |||| | |||| ||| |||||||||| |||||||| || | || Sbjct 7933 CAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCT 7992 Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATC 17549 | ||| || || ||||||||| |||| ||| ||||| |||||| ||| Sbjct 7993 TGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATC 8044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517374777605400