Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1220 264 1e-65 >seq1220 Length=9943 Score = 264 bits (292), Expect = 1e-65 Identities = 591/880 (67%), Gaps = 7/880 (1%) Strand=Plus/Plus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 ||| || | | ||||||| || | ||| |||||| || ||||||||||| ||||| Sbjct 7158 AACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGT 7217 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019 ||||| | | |||||||||||| ||||| | | | | || | || | ||| | Sbjct 7218 GGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCT-A 7276 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079 |||| | | |||||| || || |||||||| ||||| |||| ||| | | ||| || | Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139 ||||||| | | || || | || | || | ||| | ||| || || ||||||| | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 16140 CTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTA 16199 | ||| |||||| | ||| | || |||||| | || | | ||| | || Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATAATA 7456 Query 16200 GACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTA 16259 || || || || |||| | |||||| || | | || | ||| ||||| ||||||| Sbjct 7457 AGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTA 7516 Query 16260 ACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGA 16319 || ||||| ||||| || || ||||| || || | |||||| || || |||| Sbjct 7517 GACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGA 7576 Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTAC 16379 | || || || || | || ||||| | ||| || || || | || || |||||| | | Sbjct 7577 AAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGC 7636 Query 16380 GAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439 ||||||| | | |||| | ||||||| || ||| | |||||||| || | Sbjct 7637 TGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCAT 7696 Query 16440 TAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACA 16499 | || || ||||| || | ||| | |||||||| ||||| || | ||||||| Sbjct 7697 TGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACA 7756 Query 16500 TTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTA 16559 |||| || || ||||| || || || ||||| || || || || || || || | || Sbjct 7757 TTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTA 7816 Query 16560 TTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||| || || || ||||| |||||| |||| || ||||| ||||| || || ||| Sbjct 7817 CTTGAACCTCTTGAC-TAAAA-CGTTCCACCAGATTTTCATTAACGATTCCATCGGATGC 7874 Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCA 16677 ||| ||||| ||||| | || || || |||| | | |||||| || | ||| ||| Sbjct 7875 AGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCCA 7934 Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737 || | || |||| | |||| ||| |||||||| | |||||||| || | || | Sbjct 7935 ATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTTG 7994 Query 16738 TTTATACATTTTCCAAATATCATTGTATTGTA-TGGGAAA 16776 ||| || | ||||||||| |||| || ||||||| Sbjct 7995 TTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAA 8034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511245601284600