Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq22639 109 4e-19 >seq22639 Length=125898 Score = 109 bits (120), Expect = 4e-19 Identities = 339/512 (66%), Gaps = 26/512 (5%) Strand=Plus/Plus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 ||||| |||||| | ||||| | | |||||| ||||| ||||| || ||||| | ||| Sbjct 12505 TGAGCGATCATGTAGGTTAATAAGGCATAGCTTGCAATATTAAACGGTACTCCAAGACCC 12564 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT-TTCCATCACAGACATAAAATTG 101877 ||||| || ||||||||||| | | || || | || | || || ||| ||||||| Sbjct 12565 ATATCGGCAGATCTTTGATATAAAAGGCAAGATAACTCGTTATTCGCA-ACAAAAAATTG 12623 Query 101878 ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC---ATTCCAAGC 101934 || ||| ||||| || | |||||||||| || || ||| |||||| || Sbjct 12624 TACCAAGCAATGGCAAGGTGGAAGAGCCATTTTAGGTATATC---AACTGGATTCCATGC 12680 Query 101935 ACACATTAACATCCTTCTATCTGTAGGGTTTGTT-TTTATAGTATCAATCAACTGTTTTA 101993 |||||| | || | |||||| | ||| || |||| |||| |||| | | | Sbjct 12681 ACACATAATGATGCGTCTATC-ATGCGGTCGATTCCTTATTGTATTTATCACTTCCATCA 12739 Query 101994 ATTGGTCAACTCCTTCTCCT-TTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAA 102052 | || || | ||| || | |||||||| | | | |||| || || || || Sbjct 12740 ACTGATCTA-TCCCCCTATTAGTATAATCGGCATGCATATTTGTATAATCAGCCCCATAA 12798 Query 102053 TGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCA 102112 || | ||| ||||| || || | ||||| ||||| ||||| ||||| || |||||| Sbjct 12799 TGGCGCCATTGAAAGCCGTAAATTGGTCCTAGATCACCTTCTTCTCTATCGATTAAACCA 12858 Query 102113 AGTTTATCTAA-AAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGA 102171 | |||||| |||| | | || | ||| || | ||| || | ||| | || Sbjct 12859 ACAGAATCTAAGAAATCA-CGAGTACTATTTGCTTTCCATATATTGACG-----TTCTTT 12912 Query 102172 TAGCTC------TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAAC 102225 | |||| | ||| || ||| ||| | || ||||| | | ||| ||||| || Sbjct 12913 TCGCTCAAAATATGTGC-GTTAGTGCTTCCCTTAATGAACCATAGTAATTCCTCAACGAC 12971 Query 102226 ACCTCTCCAAAATACTCTCTTAGTAGTTAAAA 102257 |||||||| ||||| | ||| ||||| |||| Sbjct 12972 GCCTCTCCAGAATACACGCTTTGTAGTCAAAA 13003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361134945412655