Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1220 316 2e-81 seq9764 163 3e-35 >seq1220 Length=9943 Score = 316 bits (350), Expect = 2e-81 Identities = 626/920 (68%), Gaps = 11/920 (1%) Strand=Plus/Plus Query 23833 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTA 23892 |||| || | |||||||||||| || || |||||| ||||| ||||||||||| || Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 23893 ATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCA 23952 ||||| | | ||| ||||| |||||||| | |||||| | | ||| | | || | Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 23953 ATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCA 24012 ||| | ||||| || |||||||| || ||||| |||| || || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 24013 TTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGT 24072 ||||||| | |||| || | || | |||||||| ||||| || || ||||||| Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 24073 CTGTTATAATA--GATCTTACTG--TTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 24128 | |||||| || | | |||| | | || ||||||| | | ||| Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTG--TACAATATAAGA--AAAT 7452 Query 24129 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 24188 | || || || || || | || | || || || | |||||||| ||||| || Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512 Query 24189 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 24248 || || || ||||| || || | |||||| | |||||| || || ||||| ||| || Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572 Query 24249 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGCTGTC 24307 |||||||||||||| ||||| || || || | | | || || | || | || | Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632 Query 24308 ATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365 || ||||| | | ||||| | || || || ||| ||||| | ||| ||||| Sbjct 7633 CTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATC 7692 Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425 ||||| || | | | | ||| || || || | | ||| || ||||| | | || Sbjct 7693 GCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTG 7752 Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485 |||||||| |||||| || ||||| || |||||||| ||||| ||||| | || || Sbjct 7753 TACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCA 7812 Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 24545 || | || || ||| || ||| ||||| | | ||||||||| || ||||| || Sbjct 7813 GTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGAT 7872 Query 24546 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 24605 || || ||||| ||||| || | ||| ||||||| | | ||||| |||| ||||||| Sbjct 7873 GCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTC 7932 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 |||| || |||||| |||||| ||| |||||||| ||||||||| || || || || Sbjct 7933 CAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCT 7992 Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGA 24725 | ||| || || ||| || || |||||| ||||| |||| |||||||| || ||| Sbjct 7993 TGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGA 8052 Query 24726 TTTTTTGCAAGGATTGGTTC 24745 |||| | ||| | |||||| Sbjct 8053 TTTTCTTTAAGAAGTGGTTC 8072 >seq9764 Length=88291 Score = 163 bits (180), Expect = 3e-35 Identities = 351/524 (67%), Gaps = 3/524 (1%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 |||||||| || || | || |||||||| | |||||| ||||||||||| || | | Sbjct 27309 GTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAA 27368 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| ||||| ||||| || ||| || | ||||| || | | | Sbjct 27369 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 27428 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 27429 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 27488 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 27489 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 27548 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 | ||||||| || || |||| || | | ||| |||||| || || || | | Sbjct 27549 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 27608 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | ||| ||||| | | | | | ||||| ||||||| || || ||||||||| Sbjct 27609 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCA 27668 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 27669 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 27728 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 27729 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 27788 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 53328 | | | ||| || |||||| | ||||| ||| ||||| Sbjct 27789 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATC 27832 Score = 152 bits (168), Expect = 6e-32 Identities = 348/523 (67%), Gaps = 3/523 (1%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 |||||||| || || | || |||||||| | ||| || ||||||||||| || | | Sbjct 24173 GTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAA 24232 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| ||||| ||||| || ||| || | ||||| || | | | Sbjct 24233 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 24292 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 24293 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 24352 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 24353 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 24412 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 | ||||||| || || |||| || | | ||| |||||| || || || | | Sbjct 24413 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 24472 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | ||| ||||| | | | | | ||||| | ||||| || || ||||||||| Sbjct 24473 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCA 24532 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 24533 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 24592 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 24593 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 24652 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 53327 | | | ||| || |||||| | ||||| ||| |||| Sbjct 24653 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGAT 24695 Score = 149 bits (164), Expect = 7e-31 Identities = 327/481 (68%), Gaps = 18/481 (4%) Strand=Plus/Plus Query 53399 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 53458 || ||||||||| ||| || | ||||||||| ||||| || || | ||||| | || Sbjct 25022 TACGGTCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTC 25081 Query 53459 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 53518 ||||| |||| | |||| | |||||| ||||||| | || | || | | Sbjct 25082 TCGAAAATCTGCAAGTTTAACATGCGAGCTTCCTCGCTATCATACGGCATTCTCAACAAA 25141 Query 53519 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 53578 ||||| || || || | || || | || |||||||| |||||||||||| |||| || Sbjct 25142 ATAAAAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGAC 25201 Query 53579 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TG 53635 ||| ||| || || |||||||| ||||| ||||| || || || | ||| | || Sbjct 25202 GTTTTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTG 25261 Query 53636 ACAATTACTTTGACCACATCCTTC-AGTTTGAGAAAATC--AAATTGTCC-ATC---TAT 53688 || || ||| || | |||| ||||| | ||||| | | ||| ||| | | Sbjct 25262 ACGAT---TTTCGTGACGTTCTTCAAGTTTTCG-AAATCGTACGTCTTCCTATCCGGTTT 25317 Query 53689 TACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC--ATTAGCATCC 53746 ||| ||||| |||| ||||| || || ||||||||||| || | || || | | | Sbjct 25318 TACGAACATATTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGA--C 25375 Query 53747 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 53806 | ||| | || ||||| ||||| | || |||| ||||| ||||| | || ||||| Sbjct 25376 GTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGG 25435 Query 53807 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGG 53866 || || || || || || ||||| || || ||| | || ||||| ||||| | ||| Sbjct 25436 TTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCACTTGG 25495 Query 53867 G 53867 | Sbjct 25496 G 25496 Score = 129 bits (142), Expect = 7e-25 Identities = 410/632 (65%), Gaps = 18/632 (3%) Strand=Plus/Plus Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088 || ||||||||||| | || || |||||||| || ||| | ||| || | | | Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148 || ||| | || |||||||| || | || | ||| ||| ||||| | ||||| || Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208 |||||||| |||| | | |||| |||| |||||||| || ||||| | ||| | || Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCC 25998 Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268 || ||||| |||| || | ||| || | | ||| |||||| | || || || |||| Sbjct 25999 GTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCA 26058 Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328 ||||| |||| | || | ||||| | || || || || || || || Sbjct 26059 ATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTC 26118 Query 54329 GAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATC---CAT 54384 || || | |||||| | || | | | | || ||||| || || || ||| Sbjct 26119 GAAATGTAGGCGCATTGCGCCAAGCAGGTGA-AAATCCCCTCGATCGAGTCTTCGGGCAT 26177 Query 54385 CATGTTAAGTA-----GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 54439 ||| || | ||| | |||| ||||||| ||| |||| || Sbjct 26178 CATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTG-----TAG---CCGCCGAGAAC 26229 Query 54440 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT 54499 | || ||| |||||||||||| || | || || || |||||| || |||||| | Sbjct 26230 AGAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACG 26289 Query 54500 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 54559 | || ||||| || ||||| || || || ||||| | ||| || ||||| ||| Sbjct 26290 GCATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTT 26349 Query 54560 TCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 54619 || |||||||| || || | | || ||| | || || |||||||| || || Sbjct 26350 TCGACGATCTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTTTTAAAGCCGAAG 26409 Query 54620 TAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 || ||||| |||||||| | ||||||||||| Sbjct 26410 TAATTGTAGGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593525634764400