Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq22639 118 7e-22 >seq22639 Length=125898 Score = 118 bits (130), Expect = 7e-22 Identities = 346/520 (67%), Gaps = 20/520 (4%) Strand=Plus/Plus Query 97110 TAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGG 97169 |||| |||| | || |||||||| | ||||||| | |||||| ||||| ||||| || Sbjct 12492 TAAACCAGTAATGTGAGCGATCATGTAGGTTAATAAGGCATAGCTTGCAATATTAAACGG 12551 Query 97170 CACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCT-TTCCATCAC 97228 || || || |||||||| || |||||||||||||| | || || | || | || | Sbjct 12552 TACTCCAAGACCCATATCGGCAGATCTTTGATATAAAAGGCAAGATAACTCGTTATTCGC 12611 Query 97229 ACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGA 97288 | ||| |||| || ||| ||| || || || | |||||||| || | ||| | Sbjct 12612 A-ACAAAAAATTGTACCAAGCAATGGCAAGGTGGAAGAGCCATTTTAGGTATATCAACTG 12670 Query 97289 CATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTG--TGTGTATGGTATTAAT 97346 |||||| |||||||| | || | |||||| || | | | | ||| ||||| || Sbjct 12671 GATTCCATGCACACATAATGATGCGTCTATC--ATGCGGTCGATTCCTTATTGTATTTAT 12728 Query 97347 TATCTGCTTTAATTGATC-AACGCCTTCTCCACCATAATTG---TGCTTAAGACCTTG-A 97401 | | | | || ||||| | | || | | | ||||| | ||| || ||| | Sbjct 12729 CACTTCCATCAACTGATCTATCCCCCTAT-TAGTATAATCGGCATGCATA----TTTGTA 12783 Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || || || ||| |||| | |||||| || || |||| ||||| || || ||||||||| Sbjct 12784 TAATCAGCCCCATAATGGCGCCATTGAAAGCCGTAAATTGGTCCTAGATCACCTTCTTCT 12843 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 ||||| ||||||| |||||| | | || | |||||| | ||| || | Sbjct 12844 CTATCGATTAAACCAACAGAATCTAAGAAATCACGAGTACTATTTGCTTTCCATATATTG 12903 Query 97522 AC--ACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATT 97579 || | ||| ||| | | ||| || ||| ||| | || ||||| | |||| Sbjct 12904 ACGTTCTTTTCGCT-CAAAATATGTGC-GTTAGTGCTTCCCTTAATGAACCATAGTAATT 12961 Query 97580 CTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAA 97619 | || || || |||||||| ||||| | ||| || || || Sbjct 12962 CCTCAACGACGCCTCTCCAGAATACACGCTTTGTAGTCAA 13001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346672401115850