Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9911 129 5e-25 seq9764 122 8e-23 seq22504 107 2e-18 seq22544 93.3 4e-14 >seq9911 Length=12084 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | |||| ||| || ||||| | |||||| |||||||| || || ||||| Sbjct 4350 TACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTG 4409 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| |||||| | ||||| || || | || | ||| ||||| || |||| Sbjct 4410 AAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAG 4469 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 |||| || || |||||| |||||| |||||| | ||| | |||||||| || | || Sbjct 4470 GTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGT-TCC 4528 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | || | ||||| || || |||||||||||||| || ||||| Sbjct 4529 ACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||| | | |||||| |||| ||||| || ||||| || ||||| || Sbjct 5490 TACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAG 5549 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || | || || |||||| |||| | ||| || || || || | Sbjct 5550 ACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTG 5609 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||||||| ||||||| ||| || | ||| | || || | ||| | Sbjct 5610 GGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAA 5669 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || |||| |||||||||||||| ||||| Sbjct 5670 CTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586 || |||| ||| | || || || |||||||| |||||||| | |||||| ||| Sbjct 4823 AATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCT 4882 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || | || || ||||| | || | ||| || ||||||||||| || || ||||||||| Sbjct 4883 TCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCT 4942 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGT 118705 ||| ||| ||| || | ||| | ||| || | || | || || || | || | || Sbjct 4943 TGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGT-TCCACTTCAAGTGTAATAGT 5001 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || | |||||| |||||||||||||| Sbjct 5002 CTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || ||||| | | ||||| || | ||||| || |||||||| |||||||| Sbjct 4124 CCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAA 4183 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| ||| ||| || | |||||||| || |||| | |||||||||||| ||||| Sbjct 4184 AGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGA 4243 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || || || || |||||| |||||| | ||| | || || | || || Sbjct 4244 ATACCTTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACT 4303 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||| || || || || || ||||| || ||||| Sbjct 4304 TCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 >seq9764 Length=88291 Score = 122 bits (134), Expect = 8e-23 Identities = 320/479 (67%), Gaps = 7/479 (1%) Strand=Plus/Plus Query 133493 ATAGGGTCCGTTGATTTTGGCCAGCTCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGT 133552 ||| ||||| | | | ||||| || || |||||||||||||||||| | || | || Sbjct 25021 ATACGGTCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGT 25080 Query 133553 TTCCGCGAT-TGAATAGTTGACGAACCTGGCATCGTCGCTATCGTA-GGCGATGTCGAGA 133610 || || || | |||| | | | || || |||||||| || ||| | || | | Sbjct 25081 CTCGAAAATCTGCA-AGTTTAACATGCGAGCTTCCTCGCTATCATACGGCATTCTCAACA 25139 Query 133611 AGAACAAACGCGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTG 133670 | || ||| || ||||| | |||||||| |||| ||||| |||| |||| | |||| Sbjct 25140 A-AATAAAAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTC 25198 Query 133671 CTCCTCTCCGACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGG 133730 | | | |||| | ||||| | ||| | ||| ||||||||||| | ||||| Sbjct 25199 GACGTTTTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGC 25258 Query 133731 ACGATAATTTTAGTCAAATGTTTCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCG 133790 || ||||| || | | |||| | | || | ||||| || | Sbjct 25259 GTGACGATTTTCGTGACGTTCTTCAAGTTTTCGAAATCGTACGTCTTCCTATCCGGTTTT 25318 Query 133791 ACGCACTTGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGT-TCTCGTCGCA 133849 ||| || | || |||||||| |||||||||||||| || | |||| | | | || Sbjct 25319 ACGAACATATTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACG-T 25377 Query 133850 ATACTGGACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATT 133909 ||||| |||||||||| ||| | |||||| | |||||| || |||| || | ||| || Sbjct 25378 ATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTT 25437 Query 133910 GCTAAAGTTATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTCGACGTTGG 133968 ||| ||||||| |||||||| |||||||| || |||||||| || |||| Sbjct 25438 GCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCAC-TTGG 25495 Score = 104 bits (114), Expect = 2e-17 Identities = 350/539 (65%), Gaps = 7/539 (1%) Strand=Plus/Plus Query 132879 TCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAATAATACATGCCCGTT 132938 ||||| || || | | | | || ||||| ||||| || | | ||||||||| ||||| Sbjct 27303 TCGACAGTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTC 27362 Query 132939 TTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACCGAGTAAGTGGGTTCG 132998 |||| ||||| |||| |||| || || || | | || |||| | || | Sbjct 27363 TTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTC 27422 Query 132999 GCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCACGGTCGGCGGCCATG 133058 |||| || ||||||||| ||||||||||| ||||||| |||| ||||| || | Sbjct 27423 TCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGG 27482 Query 133059 TTTATTATACACTTTGATT--TGATCTCCCATGCCGTCTTGAAGAGATTCTTGACATGCT 133116 || || ||| ||| ||| ||| |||||| | || ||| ||| ||||||| || | Sbjct 27483 TTAATAATAACCTT--ATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCAT 27540 Query 133117 GTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATT 133176 |||||| | ||| ||||| | || || | ||| | ||| || | | || Sbjct 27541 CCGGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATC-TGATTCTTCATG 27599 Query 133177 CCGGAGT-GTAAATGTCGAGATCGATTAGCGCTTTGACGAGATACTGGTTGACCACTTGA 133235 || || | | || |||| | || | | |||| || || || || || Sbjct 27600 TCGTCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGG 27659 Query 133236 AACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGGTTCGAAAGATTCG 133295 || || || | | ||||||||| || | ||||| ||| ||||||| || |||||| Sbjct 27660 AATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCG 27719 Query 133296 TTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACCAACAAAGAGTTT 133355 || || || | || || ||||||| || || ||||| || | | ||||| ||| Sbjct 27720 TTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTT 27779 Query 133356 CTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCCACAGAT-TGTTGG 133413 ||||| || | || || || | ||| || |||| ||||| |||| |||||| Sbjct 27780 CTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATCTGTTGG 27838 Score = 102 bits (112), Expect = 7e-17 Identities = 335/515 (65%), Gaps = 7/515 (1%) Strand=Plus/Plus Query 132903 GCGGCGGGTTTTGTGCGCAAATAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAA 132962 ||||| ||||| || | | |||||||| ||||| |||| ||||| |||| |||| Sbjct 24191 GCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAACCTTTCTTCCACCCGTAG 24250 Query 132963 AAGTGTATGCTCGACACCACCGAGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGA 133022 || || || | | || |||| | || | |||| || ||||||||| ||| Sbjct 24251 AAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACGTGTAGATTCAGCGACTGA 24310 Query 133023 CTCTGATCTATGAAAGGAGCACGGTCGGCGGCCATGTTTATTATACACTTTGATT--TGA 133080 |||||||| ||||||| |||| ||||| || ||| || ||| ||| ||| || Sbjct 24311 CTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACCTT--ATTAGAGA 24368 Query 133081 TCTCCCATGCCGTCTTGAAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCA 133140 | |||||| | || ||| ||| ||||||| || | |||||| | ||| ||||| | Sbjct 24369 TTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTA 24428 Query 133141 CGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTCCGGAGT-GTAAATGTCGAGATCG 133199 || || | ||| | ||| || | | || || || | | || |||| Sbjct 24429 TCGAACCACAATTGGCGAGGATC-TGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCG 24487 Query 133200 ATTAGCGCTTTGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTG 133259 | || | | |||| ||||| || || || || || || | | ||||||||| Sbjct 24488 GTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCAGACAAGACGCGTCTG 24547 Query 133260 AGATATACATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTC 133319 || | ||||| ||| ||||||| || |||||||| || || | || || |||||| Sbjct 24548 GTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTC 24607 Query 133320 GTCGCCGTGGGCATGTACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTG 133379 | || || ||||| || | | ||||| |||||||| || | || || || Sbjct 24608 GAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTC 24667 Query 133380 CACTGCAATTCGTTCCAGTCCCACAGA-TTGTTGG 133413 | ||| || |||| ||||| ||| ||||||| Sbjct 24668 GCTTTTAATGCGCTCCAATCCCATAGATTTGTTGG 24702 >seq22504 Length=90246 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || | |||||||||||| | || || || || || || || ||||| Sbjct 25760 TACCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCG 25701 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || || || | |||||| |||||| | || ||||| ||||||||||| | Sbjct 25700 ATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTG 25641 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| |||||| || || | ||||| || || | || | Sbjct 25640 GGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAA 25581 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||||| || || || ||||| || ||||| ||||| Sbjct 25580 CCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || | ||| |||||||| | || || ||||| ||||| || ||||| Sbjct 21215 TACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCG 21156 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || || || | |||||| |||||| | || ||||| ||||||||||| | Sbjct 21155 ATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTG 21096 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| |||||| || || | ||||| || || | || | Sbjct 21095 GGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAA 21036 Query 118690 CCTCGACGGTCACCGTTTTGCCGGT-CAGA 118718 |||||| ||| | ||||| || || |||| Sbjct 21035 CCTCGAGGGTTATTGTTTTCCCTGTGCAGA 21006 >seq22544 Length=59602 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 47169 CGCTTCAATGTTACCCAGATCGCCTACGTGACGCTCGGCGGCGTTGGGAGCGCCGTGATT 47228 |||||| ||||| |||| |||||| |||||||| || | || | || ||||||||| Sbjct 43436 CGCTTCGATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATC 43495 Query 47229 GCGGCCCAACGGATTATAGTGTTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAA 47288 | || || |||| ||||||| || ||||||||||| | | |||||||| Sbjct 43496 CTTACTGTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAA 43555 Query 47289 TTCGTGCACGTGAAATCCGTGAAGCCCCTTT 47319 |||||| | ||| ||||||||||| || ||| Sbjct 43556 TTCGTGAATGTGGAATCCGTGAAGGCCTTTT 43586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433690788632260