Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1220 327 1e-84 >seq1220 Length=9943 Score = 327 bits (362), Expect = 1e-84 Identities = 573/824 (70%), Gaps = 10/824 (1%) Strand=Plus/Plus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 |||||| ||||| | |||| | |||||||| || || ||||| || || || || | Sbjct 7167 TTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGTGGATATGAT 7226 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAA 16062 | |||||||||||| ||||| ||||| ||| ||| || || || | ||| ||| Sbjct 7227 ATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAGTTCGTTCAA 7286 Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122 |||||| || || |||||||| |||||||| |||| | | ||||||||||||||||| Sbjct 7287 TAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCATTCCTATTAA 7346 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 ||||||| | || || || | ||| | || || || | |||||| || || || Sbjct 7347 GCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTCGCAAATAAT 7406 Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAATA-AGTGTTTAAACATTATA--CAAGC 16239 ||| | | | |||| || || ||| || | | | || || ||| ||||| Sbjct 7407 ATCGACGATTCGAG-ATTT--CGACGGTTTTTGTACAATATAAGAAAATAATAAGCAAGC 7463 Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299 ||| ||| ||||||||||||| || | |||||| || || || || || ||||| || Sbjct 7464 AAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTAGACCCGG 7523 Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359 ||| ||||||| ||||| | |||||| || | ||||| || || ||||| || || Sbjct 7524 CATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGAAAATTCC 7583 Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcca 16419 ||| ||||| || || || || || ||||||||| | || | |||||| ||||| Sbjct 7584 TTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGCTGATCCA 7643 Query 16420 ttttttagcccaatttgctttttgtttAACACA-GTTCATGTTCTCTATTGCATTAAATA 16478 || ||||| || ||||||| || || | | |||| ||||| ||||| |||| Sbjct 7644 TTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTT-TCTATCGCATTGAATA 7702 Query 16479 AATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTG 16538 || | | ||| ||||| || ||||| || || || || | || |||||||| Sbjct 7703 AAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACATTTCGC 7762 Query 16539 AATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTA 16598 |||||||||||| ||||| || |||||||| ||||| || | ||||| | || ||| | Sbjct 7763 TATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTACTTGAA 7822 Query 16599 CTTC-AGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657 | || || ||||| | ||| | | ||||| ||||| ||||||||| || || ||| Sbjct 7823 CCTCTTGACTAAAA-CGTTCCACCAGATTTTCATTAACGATTCCATCGGATGCAGCGAAA 7881 Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGAA 16717 || || | | || ||| ||||||| | | |||| ||| | | ||| ||| | | Sbjct 7882 AATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCCAATGATCT 7941 Query 16718 AAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 | |||| | |||||||| || ||||| |||||||| || || Sbjct 7942 ATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGC 7985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462359342133000