Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 327 1e-84
>seq1220
Length=9943
Score = 327 bits (362), Expect = 1e-84
Identities = 573/824 (70%), Gaps = 10/824 (1%)
Strand=Plus/Plus
Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002
|||||| ||||| | |||| | |||||||| || || ||||| || || || || |
Sbjct 7167 TTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGTGGATATGAT 7226
Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAA 16062
| |||||||||||| ||||| ||||| ||| ||| || || || | ||| |||
Sbjct 7227 ATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAGTTCGTTCAA 7286
Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122
|||||| || || |||||||| |||||||| |||| | | |||||||||||||||||
Sbjct 7287 TAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCATTCCTATTAA 7346
Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182
||||||| | || || || | ||| | || || || | |||||| || || ||
Sbjct 7347 GCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTCGCAAATAAT 7406
Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAATA-AGTGTTTAAACATTATA--CAAGC 16239
||| | | | |||| || || ||| || | | | || || ||| |||||
Sbjct 7407 ATCGACGATTCGAG-ATTT--CGACGGTTTTTGTACAATATAAGAAAATAATAAGCAAGC 7463
Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299
||| ||| ||||||||||||| || | |||||| || || || || || ||||| ||
Sbjct 7464 AAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTAGACCCGG 7523
Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359
||| ||||||| ||||| | |||||| || | ||||| || || ||||| || ||
Sbjct 7524 CATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGAAAATTCC 7583
Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcca 16419
||| ||||| || || || || || ||||||||| | || | |||||| |||||
Sbjct 7584 TTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGCTGATCCA 7643
Query 16420 ttttttagcccaatttgctttttgtttAACACA-GTTCATGTTCTCTATTGCATTAAATA 16478
|| ||||| || ||||||| || || | | |||| ||||| ||||| ||||
Sbjct 7644 TTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTT-TCTATCGCATTGAATA 7702
Query 16479 AATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTG 16538
|| | | ||| ||||| || ||||| || || || || | || ||||||||
Sbjct 7703 AAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACATTTCGC 7762
Query 16539 AATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTA 16598
|||||||||||| ||||| || |||||||| ||||| || | ||||| | || ||| |
Sbjct 7763 TATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTACTTGAA 7822
Query 16599 CTTC-AGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
| || || ||||| | ||| | | ||||| ||||| ||||||||| || || |||
Sbjct 7823 CCTCTTGACTAAAA-CGTTCCACCAGATTTTCATTAACGATTCCATCGGATGCAGCGAAA 7881
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGAA 16717
|| || | | || ||| ||||||| | | |||| ||| | | ||| ||| | |
Sbjct 7882 AATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCCAATGATCT 7941
Query 16718 AAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761
| |||| | |||||||| || ||||| |||||||| || ||
Sbjct 7942 ATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGC 7985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462359342133000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |