Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq22639 111 1e-19 >seq22639 Length=125898 Score = 111 bits (122), Expect = 1e-19 Identities = 343/521 (66%), Gaps = 10/521 (2%) Strand=Plus/Minus Query 20047 CCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTT 20106 ||| | || ||||| || || ||||| |||| |||||| ||||| || ||| ||||||| Sbjct 13007 CCCGTTTTGACTACAAAGCGTGTATTCTGGAGAGGCGTCGTTGAGGAATTACTATGGTTC 12948 Query 20107 ATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGA-GTTAAGATTTGGAGCGC 20165 ||||| ||| || || | || | ||| ||||| | || || || |||| || Sbjct 12947 ATTAAGGGAAGCACTAACGC-ACATATTTTGAGCGAAAAGAACGTCAATATATGGAAAGC 12889 Query 20166 ACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGATTT 20225 | || | || | || ||| | ||| || | | | |||| || ||| | Sbjct 12888 AAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGAAGAAGGTGATCT 12829 Query 20226 GGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACAC 20285 || || | || || ||||||||| | |||| ||| ||||| ||| | ||| | | Sbjct 12828 AGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATACAAATATGCATGC 12769 Query 20286 AAATTATTTTGGACAAGGAG-TAGATCAATTACAAAATGTTATTAATTTAATTA--AAAC 20342 ||||| | | | || | ||||||| || | || || ||| ||| | || | Sbjct 12768 CGATTATACTA-ATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACAATAAGGAATC 12710 Query 20343 GAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAAT 20402 || | || || ||| | || ||| | || || ||||| | ||| | ||| ||| Sbjct 12709 GACCGCAT--GATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATACCTAAAAT 12652 Query 20403 GGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGTCGT 20461 |||| | || || || ||| |||| | ||||||| ||||| ||||| || || || | Sbjct 12651 GGCTCTTCCACCTTGCCAT-TGCTTGGTACAATTTTTTGTTGCGAATAACGAGTTATCTT 12593 Query 20462 GTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTT 20521 | | | |||||| |||| || |||||||| || || || || || ||||||||||| | Sbjct 12592 GCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTAATATTGCAAGCT 12533 Query 20522 ATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562 |||| | | || || ||||| || || |||| | |||| Sbjct 12532 ATGCCTTATTAACCTACATGATCGCTCACATTACTGGTTTA 12492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399055538222725