Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 372 3e-98
>seq1220
Length=9943
Score = 372 bits (412), Expect = 3e-98
Identities = 646/926 (70%), Gaps = 20/926 (2%)
Strand=Plus/Plus
Query 13902 TAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCA 13961
||||||| | |||||| ||||| | |||| |||||||||| |||||||||||||| |||
Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216
Query 13962 GTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTA 14021
||||| | | |||||||||||||||||| |||| || | ||||| ||||||||||
Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276
Query 14022 GTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCA 14081
|||| | |||||| || || | || |||||||| ||| ||| | | || ||||
Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336
Query 14082 TACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCT 14141
| ||||||| | ||||| | || ||| | ||| |||| || || || || |
Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396
Query 14142 CGTTTATAATAATCGTAATAATTTCA---TTAGAAGGAGGATATTTTAGATGTTTA-AAA 14197
|| |||||| ||| | ||| | || || || | || || | | | |||
Sbjct 7397 CGCAAATAATA-TCG--ACGATTCGAGATTTCGACGGT---TTTTGTACAATATAAGAAA 7450
Query 14198 AT--TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 14255
|| ||| || ||||| ||| |||| | || ||||| | || | ||| || || |
Sbjct 7451 ATAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGA 7510
Query 14256 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315
| |||| || ||||| | ||||| ||||| |||||||| |||| ||| || |||||
Sbjct 7511 AAGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGG 7570
Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375
| ||||| ||||| || |||||||| || |||| ||| || || || || | || | ||
Sbjct 7571 AGAAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTT 7630
Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435
| | ||||||| ||||| | || |||||| | || | |||||| |
Sbjct 7631 TACTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTA 7690
Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAA 14493
| ||||| |||||| ||| |||||||| | | ||| || | || |||||||| |
Sbjct 7691 TCGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATAT--ACGTTTCAATAAGCAT 7748
Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553
||| |||||||| || || || || || || || |||||||| |||||||| | ||
Sbjct 7749 GCTGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGC 7808
Query 14554 TTCTGACCATTGTACCTCT-GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612
||| | ||| |||||| || ||||| | ||| ||| |||||||||||| || ||||
Sbjct 7809 TTCAGTTACTTGAACCTCTTGACTAAAA-CGTTCCACCAGATTTTCATTAACGATTCCAT 7867
Query 14613 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTT 14672
| || || ||||||||||| | || ||| ||||| | | ||| |||| | | | ||
Sbjct 7868 CGGATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATT 7927
Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732
| ||||||| ||| ||| |||| | ||||||||| || ||||||||| ||
Sbjct 7928 TATTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTT 7987
Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TT 14791
| |||| ||| || | |||| || || |||| ||| || ||||| ||||||| ||
Sbjct 7988 CGGCTTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTT 8047
Query 14792 GAAGATGTTTCTTTAAGAATTGGTTC 14817
||| |||||||||||| ||||||
Sbjct 8048 TGGGAT-TTTCTTTAAGAAGTGGTTC 8072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482186395805400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |