Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1220 372 3e-98 >seq1220 Length=9943 Score = 372 bits (412), Expect = 3e-98 Identities = 646/926 (70%), Gaps = 20/926 (2%) Strand=Plus/Plus Query 13902 TAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCA 13961 ||||||| | |||||| ||||| | |||| |||||||||| |||||||||||||| ||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 13962 GTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTA 14021 ||||| | | |||||||||||||||||| |||| || | ||||| |||||||||| Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 14022 GTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCA 14081 |||| | |||||| || || | || |||||||| ||| ||| | | || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 14082 TACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCT 14141 | ||||||| | ||||| | || ||| | ||| |||| || || || || | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 14142 CGTTTATAATAATCGTAATAATTTCA---TTAGAAGGAGGATATTTTAGATGTTTA-AAA 14197 || |||||| ||| | ||| | || || || | || || | | | ||| Sbjct 7397 CGCAAATAATA-TCG--ACGATTCGAGATTTCGACGGT---TTTTGTACAATATAAGAAA 7450 Query 14198 AT--TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 14255 || ||| || ||||| ||| |||| | || ||||| | || | ||| || || | Sbjct 7451 ATAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGA 7510 Query 14256 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315 | |||| || ||||| | ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 7511 AAGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGG 7570 Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375 | ||||| ||||| || |||||||| || |||| ||| || || || || | || | || Sbjct 7571 AGAAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTT 7630 Query 14376 TGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 | | ||||||| ||||| | || |||||| | || | |||||| | Sbjct 7631 TACTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTA 7690 Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAA 14493 | ||||| |||||| ||| |||||||| | | ||| || | || |||||||| | Sbjct 7691 TCGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATAT--ACGTTTCAATAAGCAT 7748 Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553 ||| |||||||| || || || || || || || |||||||| |||||||| | || Sbjct 7749 GCTGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGC 7808 Query 14554 TTCTGACCATTGTACCTCT-GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612 ||| | ||| |||||| || ||||| | ||| ||| |||||||||||| || |||| Sbjct 7809 TTCAGTTACTTGAACCTCTTGACTAAAA-CGTTCCACCAGATTTTCATTAACGATTCCAT 7867 Query 14613 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTT 14672 | || || ||||||||||| | || ||| ||||| | | ||| |||| | | | || Sbjct 7868 CGGATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATT 7927 Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732 | ||||||| ||| ||| |||| | ||||||||| || ||||||||| || Sbjct 7928 TATTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTT 7987 Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TT 14791 | |||| ||| || | |||| || || |||| ||| || ||||| ||||||| || Sbjct 7988 CGGCTTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTT 8047 Query 14792 GAAGATGTTTCTTTAAGAATTGGTTC 14817 ||| |||||||||||| |||||| Sbjct 8048 TGGGAT-TTTCTTTAAGAAGTGGTTC 8072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482186395805400