Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq22639 109 7e-19 >seq22639 Length=125898 Score = 109 bits (120), Expect = 7e-19 Identities = 230/345 (67%), Gaps = 21/345 (6%) Strand=Plus/Minus Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATAT-----T 104457 |||| ||||||| ||||| || ||||| ||| | |||||||| | |||||| | Sbjct 12834 TGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATACAAATAT 12775 Query 104458 GGGTGC-GATAATAAATATGGTGGTATAGATCAACTCAAAAATATTATTACAACAATTCA 104516 | ||| ||| ||| || | || |||||||| | | | | || | ||||| Sbjct 12774 GCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACAATAAG 12715 Query 104517 AAATGAACCTTGGGATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAA 104576 ||| ||| |||||| | || || | | || ||||| ||| |||| |||| Sbjct 12714 GAATCGACCGCATGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATACCTAA 12655 Query 104577 AATGGCACTTCCTCCTTGTCATTGTATAGCACATTTTGATGTAAGTTCAAAAATAAATGG 104636 |||||| ||||| ||||| ||||| | | ||| ||| ||| || Sbjct 12654 AATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGT---------------TGC 12610 Query 104637 TAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATCTGCAGATATGGGGTTGGGAGTTCC 104696 || | || || ||||| | ||||| |||||||||||| |||||||| | ||||| || Sbjct 12609 GAATAACGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACC 12550 Query 104697 TTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCA 104741 ||||| || ||||| ||||| |||||||| | || || ||||| Sbjct 12549 GTTTAATATTGCAAGCTATGCCTTATTAACCTACATGATCGCTCA 12505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679590018759600