Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 109 4e-19
>seq9911
Length=12084
Score = 109 bits (120), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172
||| |||| || || || ||||| ||||| || |||||||| | || ||| | |||
Sbjct 5506 AAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATC 5565
Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||||||||| ||||| || |||| | | |||||| || || | ||||||||| ||
Sbjct 5566 TTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTC 5625
Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
||||| |||| || || | | ||| || || ||||| ||| | || |||
Sbjct 5626 TTGAATTT-TTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGG 5684
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| || ||||| ||||||||||||||||||||
Sbjct 5685 TTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172
||| |||| || || || ||||| ||||| || || ||||| | || |||| | |||
Sbjct 5770 AAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATC 5829
Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||||||||| ||||| || |||| | | |||||| || || | ||||||||| ||
Sbjct 5830 TTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTC 5889
Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
||||| |||| || || | | ||| || || ||||| ||| | || |||
Sbjct 5890 TTGAATTT-TTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGG 5948
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| || ||||| ||||| ||||||||||||||
Sbjct 5949 TTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 95.1 bits (104), Expect = 9e-15
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 18116 TACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTC 18175
||||| |||||| |||||||| |||||||| ||||| || | | || || ||||||
Sbjct 4825 TACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTC 4884
Query 18176 CAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGC 18235
|||||| ||||| ||| | || | | ||||||||| || | |||||||| ||
Sbjct 4885 CAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTG 4944
Query 18236 AATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
||| | |||| || || | | | | || ||| | || || ||||| || || | |
Sbjct 4945 AATCT-TTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCT 5003
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| || || || ||||| |||||||| |||||
Sbjct 5004 TACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379221922951725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |