Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 96.9 3e-15
>seq9911
Length=12084
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||||||||| || || || ||||| || || ||||| || | || || || |
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|| | | | |||| ||| || | ||||||| | |||||||| | || |||||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|||||||| || | ||| || |||||| |||||||| ||| | ||||| | |
Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| || |||||| | || || ||||| || ||||||||| | || |||
Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGT 5263
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||||||||| ||||| || || || || || | || || ||| | |||
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAA-CCAGC 4976
Query 24892 -GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950
|| | |||||| ||| || | ||| ||| | || ||||| | || || ||
Sbjct 4975 TGATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCA 4916
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGATTAC 25008
|||||||| |||| ||| ||||| ||| |||||||| || |||| | ||||||
Sbjct 4915 ACAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCA--GATTAC 4858
Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058
| || || || || | || ||||| | || ||||| ||| | |||||
Sbjct 4857 AATATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGG 4808
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| || ||||| ||||| | || || ||||| || || | || || ||| |
Sbjct 4578 ATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATCG 4519
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | |||| ||||| | |||||| | |||||||| |||| ||||||
Sbjct 4518 GACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCAG 4459
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|||||||| || | ||| || |||||| |||| ||| | || | ||||| |
Sbjct 4458 CAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAAT 4399
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| || ||||| | || || || ||||| || |||||| | ||||||
Sbjct 4398 ATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGT 4351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418169385197600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |