Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 150 4e-31
seq1220 116 7e-21
>seq22639
Length=125898
Score = 150 bits (166), Expect = 4e-31
Identities = 368/548 (67%), Gaps = 10/548 (2%)
Strand=Plus/Minus
Query 35153 GATAGAACTGGAACAGGAACTCTATCC-ATTTTTGGACCCCAAATGAGGTTCTCTCTTCG 35211
||| | |||||| ||||| ||| | |||||||| | |||||||||| ||||| ||
Sbjct 13079 GATCGTACTGGAGTTGGAACA-TATGCTATTTTTGGCGCGCAAATGAGGTATTCTCTACG 13021
Query 35212 AGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGA 35271
|||| | | || || ||| | ||||| ||| | ||||||||||| || || || ||
Sbjct 13020 AGACAATATAATCCCCGTTTTGACTACAAAGCGTGTATTCTGGAGAGGCGTCGTTGAGGA 12961
Query 35272 ACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACA 35331
| | |||||||| | ||| | || |||| | ||| | | ||||| | |
Sbjct 12960 ATTACTATGGTTCATTAAGGGAAGCACTAACGCACATATTTTGAGCGAAAAGAACGTCAA 12901
Query 35332 CATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGC 35391
|| ||||| || ||| | | || || || || || | || ||| ||||||||
Sbjct 12900 TATATGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGA 12841
Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451
||| || ||| | ||||| | ||||| || |||||||| |||| ||| ||||| ||| |
Sbjct 12840 AGAAGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTAT-A 12782
Query 35452 TACCTGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGA 35510
| | | | | ||||||||||| | ||| || ||||| ||| | | |||| |
Sbjct 12781 CAAATATGCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATA 12722
Query 35511 CCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570
| | || | || |||||||| | || |||||| ||||||||||| | |||
Sbjct 12721 CAATAAGGAATCGACCGCATGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATA 12662
Query 35571 TTCACCT--TATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATG 35627
| |||| ||||||||||| || ||||| || || | ||||||| ||| || |||
Sbjct 12661 T--ACCTAAAATGGCTCTTCCACCTTGCCA-TTGCTTGGTACAATTTTTTGTTGCGAATA 12605
Query 35628 GAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCA 35687
|| || || |||| || ||||| || | ||| | || | || || || || |
Sbjct 12604 ACGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTA 12545
Query 35688 ATATTGCA 35695
||||||||
Sbjct 12544 ATATTGCA 12537
>seq1220
Length=9943
Score = 116 bits (128), Expect = 7e-21
Identities = 289/438 (66%), Gaps = 3/438 (1%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| || || |||||||| |||||||| ||||| || || || || ||||| |||
Sbjct 7604 GTAGCTTTCGCTGCAGTCGAAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGG 7545
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || || || |||| ||||| || | ||||||||| || || || | ||
Sbjct 7544 TTGAAAAAGAGAGGACTTATGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGAT 7485
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
||||| | ||| || ||||| ||| | | || | | |||| | | ||
Sbjct 7484 GAAGGATTGCATTATGAATTTGCTTGCTTATTATTTTCTTA---TATTGTACAAAAACCG 7428
Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157
|| | | | || | || ||| | || || || ||| || ||||| |||||
Sbjct 7427 TCGAAATCTCGAATCGTCGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTT 7368
Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATT 102217
|| | | || ||||||||| ||| | |||||||||||||| | ||||| ||||| |||
Sbjct 7367 ACCGATGCCTTGCCTGTTAGCTTAATAGGAATGAACTGCAAATCTATGAGTCAGTATATT 7308
Query 102218 GAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACC 102277
|||||||| || || | | ||||| ||| | || ||||| |||||| | |
Sbjct 7307 GAATTTGTCGCTGACAGATTATTGAACGAACTAGGTTGTGAAAAAGTTTATAATTCAAGC 7248
Query 102278 AACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAG 102337
|| || || || ||| | | || ||| ||| ||| || ||||||||||||||
Sbjct 7247 AATCCATTTGATTTTATGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAA 7188
Query 102338 AGAGTCGCCGAGTATCAA 102355
| ||| | || || |||
Sbjct 7187 AAAGTTGGAGAATACCAA 7170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989249209816775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |