Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq22639 150 4e-31 seq1220 116 7e-21 >seq22639 Length=125898 Score = 150 bits (166), Expect = 4e-31 Identities = 368/548 (67%), Gaps = 10/548 (2%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCC-ATTTTTGGACCCCAAATGAGGTTCTCTCTTCG 35211 ||| | |||||| ||||| ||| | |||||||| | |||||||||| ||||| || Sbjct 13079 GATCGTACTGGAGTTGGAACA-TATGCTATTTTTGGCGCGCAAATGAGGTATTCTCTACG 13021 Query 35212 AGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGA 35271 |||| | | || || ||| | ||||| ||| | ||||||||||| || || || || Sbjct 13020 AGACAATATAATCCCCGTTTTGACTACAAAGCGTGTATTCTGGAGAGGCGTCGTTGAGGA 12961 Query 35272 ACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACA 35331 | | |||||||| | ||| | || |||| | ||| | | ||||| | | Sbjct 12960 ATTACTATGGTTCATTAAGGGAAGCACTAACGCACATATTTTGAGCGAAAAGAACGTCAA 12901 Query 35332 CATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGC 35391 || ||||| || ||| | | || || || || || | || ||| |||||||| Sbjct 12900 TATATGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGA 12841 Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451 ||| || ||| | ||||| | ||||| || |||||||| |||| ||| ||||| ||| | Sbjct 12840 AGAAGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTAT-A 12782 Query 35452 TACCTGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGA 35510 | | | | | ||||||||||| | ||| || ||||| ||| | | |||| | Sbjct 12781 CAAATATGCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATA 12722 Query 35511 CCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570 | | || | || |||||||| | || |||||| ||||||||||| | ||| Sbjct 12721 CAATAAGGAATCGACCGCATGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATA 12662 Query 35571 TTCACCT--TATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATG 35627 | |||| ||||||||||| || ||||| || || | ||||||| ||| || ||| Sbjct 12661 T--ACCTAAAATGGCTCTTCCACCTTGCCA-TTGCTTGGTACAATTTTTTGTTGCGAATA 12605 Query 35628 GAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCA 35687 || || || |||| || ||||| || | ||| | || | || || || || | Sbjct 12604 ACGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTA 12545 Query 35688 ATATTGCA 35695 |||||||| Sbjct 12544 ATATTGCA 12537 >seq1220 Length=9943 Score = 116 bits (128), Expect = 7e-21 Identities = 289/438 (66%), Gaps = 3/438 (1%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || |||||||| |||||||| ||||| || || || || ||||| ||| Sbjct 7604 GTAGCTTTCGCTGCAGTCGAAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGG 7545 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || || || |||| ||||| || | ||||||||| || || || | || Sbjct 7544 TTGAAAAAGAGAGGACTTATGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGAT 7485 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||| | ||| || ||||| ||| | | || | | |||| | | || Sbjct 7484 GAAGGATTGCATTATGAATTTGCTTGCTTATTATTTTCTTA---TATTGTACAAAAACCG 7428 Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157 || | | | || | || ||| | || || || ||| || ||||| ||||| Sbjct 7427 TCGAAATCTCGAATCGTCGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTT 7368 Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATT 102217 || | | || ||||||||| ||| | |||||||||||||| | ||||| ||||| ||| Sbjct 7367 ACCGATGCCTTGCCTGTTAGCTTAATAGGAATGAACTGCAAATCTATGAGTCAGTATATT 7308 Query 102218 GAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACC 102277 |||||||| || || | | ||||| ||| | || ||||| |||||| | | Sbjct 7307 GAATTTGTCGCTGACAGATTATTGAACGAACTAGGTTGTGAAAAAGTTTATAATTCAAGC 7248 Query 102278 AACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAG 102337 || || || || ||| | | || ||| ||| ||| || |||||||||||||| Sbjct 7247 AATCCATTTGATTTTATGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAA 7188 Query 102338 AGAGTCGCCGAGTATCAA 102355 | ||| | || || ||| Sbjct 7187 AAAGTTGGAGAATACCAA 7170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989249209816775