Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1220 318 7e-82 seq9764 163 4e-35 >seq1220 Length=9943 Score = 318 bits (352), Expect = 7e-82 Identities = 615/902 (68%), Gaps = 9/902 (1%) Strand=Plus/Plus Query 33280 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCA 33339 |||| || | |||||||||||| || || |||||| ||||| |||||||| || ||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 33340 ATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCA 33399 ||||| | | ||| |||||||| |||||| | ||| |||| ||||| | | || | Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 33400 ATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCA 33459 ||| | ||||| || ||||| ||||| ||||| |||| || || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 33460 TTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCAT 33519 ||||||| | |||| || | || | |||||||| ||||| || || ||||| | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 33520 TTGTTATAATAAATCTAACGGTTTC---TTCACTCGGTGGATGTAATAAATGTTTAAACA 33576 |||||| || | || || || |||| |||| | || ||| | Sbjct 7397 CGCAAATAATA--TCGA-CGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATA 7453 Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636 || || || || || | |||| || || || | |||||||| || || || | Sbjct 7454 ATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAG 7513 Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696 | || || ||||| || || | |||||| | |||||| || ||||| || |||||| | Sbjct 7514 TTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGA 7573 Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCTGTCA 33755 |||| |||||||| |||||||| || || | | | ||| || | || | || | Sbjct 7574 AGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTAC 7633 Query 33756 TGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813 || ||||| | | ||||| | || || || ||| ||||| | |||||||| | Sbjct 7634 TGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCG 7693 Query 33814 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33873 |||| || | | | | ||| || || || | | ||| || || || | | || | Sbjct 7694 CATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGT 7753 Query 33874 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33933 ||||||| |||||| || ||||| || || ||||| ||||| ||||| | || || | Sbjct 7754 ACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAG 7813 Query 33934 TAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGG 33993 | | || || ||| || ||| ||||| | | ||||||||| || |||||||| | Sbjct 7814 TTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATG 7873 Query 33994 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCC 34053 | || ||||| ||||| || | ||| ||||||| | | ||||| |||| |||||||| Sbjct 7874 CAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCC 7933 Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 ||| || |||||| |||||| ||| |||||||| ||||||||| || || || || | Sbjct 7934 AATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTT 7993 Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGAT 34173 ||| || || ||| || || |||||| |||||||||| |||||||| || |||| Sbjct 7994 GTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGAT 8053 Query 34174 TT 34175 || Sbjct 8054 TT 8055 >seq9764 Length=88291 Score = 163 bits (180), Expect = 4e-35 Identities = 353/525 (67%), Gaps = 5/525 (1%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 |||||||| || || | || |||||||| | |||||| ||||||||||| || | | Sbjct 27309 GTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAA 27368 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || |||| ||||| ||||| || || || | ||||| || | | | Sbjct 27369 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 27428 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 27429 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 27488 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 27489 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 27548 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 | ||||||| || || |||| || | | ||| |||||| || || || | | Sbjct 27549 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 27608 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | ||| ||||| | | | | | ||||| | ||||| || |||||||||||| Sbjct 27609 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCA 27668 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 27669 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 27728 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 27729 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 27788 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTC-CCAATTCCAAAGATC 62566 | | | ||| || |||||| ||| | ||||| ||| ||||| Sbjct 27789 TGTTTAGCGATCTTCGCTTTTA-ATGCGCTCCAATCCCATAGATC 27832 Score = 161 bits (178), Expect = 1e-34 Identities = 352/524 (67%), Gaps = 5/524 (1%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 |||||||| || || | || |||||||| | ||| || ||||||||||| || | | Sbjct 24173 GTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAA 24232 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || |||| ||||| ||||| || || || | ||||| || | | | Sbjct 24233 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 24292 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 24293 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 24352 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 24353 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 24412 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 | ||||||| || || |||| || | | ||| |||||| || || || | | Sbjct 24413 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 24472 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | ||| ||||| | | | | | ||||| ||||||| || |||||||||||| Sbjct 24473 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCA 24532 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 24533 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 24592 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 24593 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 24652 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTC-CCAATTCCAAAGAT 62565 | | | ||| || |||||| ||| | ||||| ||| |||| Sbjct 24653 TGTTTAGCGATCTTCGCTTTTA-ATGCGCTCCAATCCCATAGAT 24695 Score = 127 bits (140), Expect = 3e-24 Identities = 318/474 (67%), Gaps = 18/474 (4%) Strand=Plus/Plus Query 62636 ATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGT 62695 ||| ||||||||| ||| || | || |||||| ||||| || || | ||||| | || Sbjct 25021 ATACGGTCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGT 25080 Query 62696 TTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 62755 || || |||| | |||| | |||||| ||||||| | || | || | Sbjct 25081 CTCGAAAATCTGCAAGTTTAACATGCGAGCTTCCTCGCTATCATACGGCATTCTCAACAA 25140 Query 62756 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62815 |||||| || || || | || || | || |||||||| |||||||||||| |||| || Sbjct 25141 AATAAAAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGA 25200 Query 62816 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---T 62872 ||| ||| || || |||||||| ||||| ||||| || || || | || | | Sbjct 25201 CGTTTTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGT 25260 Query 62873 GACAATTACTTTGACCACATCCTTC-AGTTTGAGAAAATC--AAATC-GCCCATC---TA 62925 ||| || ||| || | |||| ||||| | ||||| | || || ||| | Sbjct 25261 GACGAT---TTTCGTGACGTTCTTCAAGTTTTCG-AAATCGTACGTCTTCCTATCCGGTT 25316 Query 62926 TTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTC--ATTAGCATC 62983 |||| ||||| |||| |||| || || |||||||| || || | || || | | Sbjct 25317 TTACGAACATATTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGA-- 25374 Query 62984 CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTG 63043 || ||| | || ||||| ||||| | || |||| ||||| ||||| | || ||||| Sbjct 25375 CGTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTG 25434 Query 63044 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63097 || || || || || || ||||| || || ||| | || ||||| ||||| Sbjct 25435 GTTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTC 25488 Score = 122 bits (134), Expect = 1e-22 Identities = 403/624 (65%), Gaps = 2/624 (0%) Strand=Plus/Plus Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326 || ||||||||||| | || || |||||||| || ||| | ||| || | | | Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386 || ||| | || |||||||| || | || | ||| ||| ||||| | ||||| || Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446 |||||||| ||||| | | |||| |||| |||||||| || ||||| | ||| | || Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCC 25998 Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506 || ||||| |||| || | ||| || | | |||||| |||| || || || |||| Sbjct 25999 GTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCA 26058 Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 ||||| ||| | || | ||||| | || || || || || || || Sbjct 26059 ATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTC 26118 Query 63567 GAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 || || | |||||| | || | || | | || || || || || ||| ||| Sbjct 26119 GAAATGTAGGCGCATTGCGCCAAGCAGGTGA-AAATCCCCTCGATCGAGTCTTCGGGCAT 26177 Query 63626 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGG 63685 | | || || || ||| | || | | || |||| || | || || Sbjct 26178 CATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTGTAGCCGCCGAGAACAGAGTCGG 26237 Query 63686 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63745 | |||||||||||| || | || || || |||||| || || ||| | | || || Sbjct 26238 ACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACGGCATCGAT 26297 Query 63746 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAAT 63805 ||| || ||||| || || || ||||| | ||| || ||||| ||||| || || Sbjct 26298 ATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTTTCGACGAT 26357 Query 63806 TTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63865 || || || || | || ||| | || || |||||||| || || || ||||| Sbjct 26358 CTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTTTTAAAGCCGAAGTAATTGTA 26417 Query 63866 TGAAAAGTCTCGTTCGTAAATAAT 63889 |||||||| | ||||||||||| Sbjct 26418 GGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629609720828400