Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 293 2e-74
seq9764 187 2e-42
>seq1220
Length=9943
Score = 293 bits (324), Expect = 2e-74
Identities = 648/958 (68%), Gaps = 29/958 (3%)
Strand=Plus/Plus
Query 11268 TAAAAATTATTAATTAAAAATCTATATCCGTAGAAAATATATTCTCTT---CTTTATTTG 11324
||||||| | |||||||| || ||| |||| |||| ||| || | | | |||
Sbjct 7099 TAAAAATAA--AATTAAAAGTCAGCATCTGTAGTGAATACATTATCCAAGACATCACTTG 7156
Query 11325 TAAACACCCCCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTT 11384
||| | || | ||||| ||||| | |||| | ||| ||||| ||||| ||||| |
Sbjct 7157 TAA---CGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCT 7213
Query 11385 CTAGTGATAT-ATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAA 11443
| ||||| ||| || ||||| ||| ||||| | ||| | ||||||||||||
Sbjct 7214 CCGTGGATATGATATTC-ATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAA 7272
Query 11444 CCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAA 11503
|||| || | |||||||| || ||||| ||||| ||||||||| ||| | ||
Sbjct 7273 CCTAGTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAG 7332
Query 11504 TTCATACCTAT-AAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAAC 11562
||||| ||||| ||| | || || | ||| | || | |||||| | || || | |||
Sbjct 7333 TTCATTCCTATTAAGCTA-ACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAAC 7391
Query 11563 CGCATC--AATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTA 11620
||| || || | |||||||| | | | || || ||| |||| | || |
Sbjct 7392 CGCGTCGCAAATAATATCGACGATTCGAGAT--TTCGACGGTTTTTGTACAATATAAGAA 7449
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|| | ||| || ||||| ||| |||| || ||||| || | ||||| |||||| ||
Sbjct 7450 AATAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAG 7509
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| |||| || ||||| | ||||| ||||| | |||||| || | |||||| ||
Sbjct 7510 AAAGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCG 7569
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTG 11797
|| ||||| ||||| || || || || || ||||||| | || || | |||
Sbjct 7570 GAGAAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCT 7629
Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857
|| || ||||||| |||||| | |||||| || |||||| | |||||||
Sbjct 7630 TTACTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCT 7689
Query 11858 ATAGCGTTAAATAAATGCATTTTTTCTATATTA--TCTCTTACATATGTATCTATTAATA 11915
|| || || |||||| ||| ||||| | | || || | ||| || || || | |
Sbjct 7690 ATCGCATTGAATAAAA--ATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCA 7747
Query 11916 AACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTG 11975
|| |||||||| ||||||||| || || || |||||||| || || ||||| || |
Sbjct 7748 TGCTGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGG 7807
Query 11976 CCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCAT 12035
| || | || || || | ||| | |||| | | ||| ||||| || || ||||
Sbjct 7808 CTTCAGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCAT 7867
Query 12036 CACTAGATGCA---AAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA 12092
| |||||| |||||||| | | | ||| ||||| | | | ||||| | ||||
Sbjct 7868 CG---GATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTA 7924
Query 12093 ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTG 12152
|||||| ||||| ||||| |||| | ||||||||||||||||| |||||||| |
Sbjct 7925 ATTTATTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGG 7984
Query 12153 CCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210
| | | |||||| || | ||| ||||| |||| | || ||||||| ||| ||
Sbjct 7985 CTTCGGCTTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAA 8042
>seq9764
Length=88291
Score = 187 bits (206), Expect = 2e-42
Identities = 388/572 (68%), Gaps = 7/572 (1%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|| || ||||||| |||||| |||| || | ||| ||||| | |||||||||||| ||
Sbjct 27303 TCGACAGTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTC 27362
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| | || |||| ||||| ||||| || || || |||| |||| ||
Sbjct 27363 TTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTC 27422
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
|| | | || ||| || ||||| ||||| || || || || | ||||| ||
Sbjct 27423 TCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGG 27482
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| | |||| || | ||| || ||||| || ||||| || || | || |||| |||
Sbjct 27483 TTAATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCC 27542
Query 37030 GGTAAATCTA-AATGTT--GAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086
|||| | ||| || | || |||||| || | || |||||| |||||
Sbjct 27543 GGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCG 27602
Query 37087 TTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAA 37146
| | ||| | || |||| | || || | ||| || || |||| || ||||| ||
Sbjct 27603 TCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAAT 27662
Query 37147 TCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTA 37206
|||||||| || || | ||| || || || || ||| || ||||||| ||| || |||
Sbjct 27663 TCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTA 27722
Query 37207 TTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTC 37266
|| | ||| ||||||| || || || || ||||| ||||||| || | ||||||
Sbjct 27723 TTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTT 27782
Query 37267 AATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-GTT 37325
| |||||| || || || ||||| | | |||||||||||| ||||||||| |||
Sbjct 27783 ACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATCTGTTGGCGTT 27842
Query 37326 -CTTTAACCACATATCATATTGTAGAATACCT 37356
| || ||||||||| ||||||| |||||||
Sbjct 27843 ACGTT--CCACATATCGTATTGTAAAATACCT 27872
Score = 168 bits (186), Expect = 6e-37
Identities = 384/572 (67%), Gaps = 7/572 (1%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|| || ||||||| |||||| |||| || | ||| || || | ||||||||||| ||
Sbjct 24167 TCGACAGTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTC 24226
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| | || |||| ||||| ||||| || || || |||| |||| ||
Sbjct 24227 TTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTC 24286
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
|| | | || ||| || ||||| ||||| || || || || | ||||| ||
Sbjct 24287 TCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGG 24346
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| | |||| || | ||| || ||||| || ||||| || || | || |||| |||
Sbjct 24347 TTAATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCC 24406
Query 37030 GGTAAATCTA-AATGTT--GAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086
|||| | ||| || | || |||||| || | || |||||| |||||
Sbjct 24407 GGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCG 24466
Query 37087 TTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAA 37146
| | ||| | || |||| | || || | ||| || || | || || ||||| ||
Sbjct 24467 TCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAAT 24526
Query 37147 TCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTA 37206
|||||||| || || | ||| || || || || ||| || ||||||| ||| || |||
Sbjct 24527 TCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTA 24586
Query 37207 TTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTC 37266
|| | ||| ||||||| || || || || ||||| ||||||| || | ||||||
Sbjct 24587 TTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTT 24646
Query 37267 AATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-GTT 37325
| |||||| || || || ||||| | | |||||||||||| || |||||| |||
Sbjct 24647 ACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATTTGTTGGCGTT 24706
Query 37326 -CTTTAACCACATATCATATTGTAGAATACCT 37356
| || ||||||||| ||||||| |||||||
Sbjct 24707 ACGTT--CCACATATCGTATTGTAAAATACCT 24736
Score = 116 bits (128), Expect = 3e-21
Identities = 405/626 (65%), Gaps = 12/626 (2%)
Strand=Plus/Plus
Query 38014 TCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTA 38073
|| ||||||| |||||| || || |||| ||| | ||| ||| ||||| | | |
Sbjct 25816 TCGACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGC 25875
Query 38074 TATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCAT 38133
||||||| | || |||||| | || | | ||||| || ||||| ||||||||
Sbjct 25876 GCTTCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAG 25935
Query 38134 GGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTA 38193
|| || | ||||| | | ||||| || || || | || || |||| || || |
Sbjct 25936 GGCTCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGC 25995
Query 38194 ACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCG 38253
| || ||||| | | |||| ||| || || | ||| || ||| |||||| | |||
Sbjct 25996 GCCGTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCG 26055
Query 38254 GATATATAAGTACCCTTAGCTCGTATATT----ACTTATCGACAATCCTATTCCACCTGC 38309
| |||||||| || || |||| |||||| || | | | || || || || ||
Sbjct 26056 GCAATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTT----ACGCCGATACCGCCGGC 26111
Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAA-CGTATCAAATATACCTTCTATACTGTCAT 38368
|| || || | |||||||| || | | ||| || || || || ||| |
Sbjct 26112 TGACTTCGAAATGTAGGCGCATTGCGCCAAGCAGGTGAAA-ATCCCCTCGATCGAGTCTT 26170
Query 38369 CCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATA 38428
| || | | || || ||| | ||||| ||| || | || || |
Sbjct 26171 CGGGCATCATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTGTAGCCGCCGAGAACA 26230
Query 38429 ATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACAT 38488
|| ||| || || | || || | ||||| | ||||| || ||||| || ||
Sbjct 26231 GAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACGG 26290
Query 38489 CATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTT 38548
|||| ||||| ||||||| || || | || ||||| ||| ||||||||||| || ||||
Sbjct 26291 CATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTTT 26350
Query 38549 CTATTATTTTATTATT-CTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAA 38607
| | || ||| ||| || |||| ||||||||| | ||||| ||||| | || ||
Sbjct 26351 CGACGATCTTACCATTAATGCGTAAG-AGATACGATCTCTCTAAGGTTTTAAAGCCGAAG 26409
Query 38608 TAACTATATGAATAATCTCTATCGTA 38633
||| | || ||| | || || |||||
Sbjct 26410 TAATTGTAGGAAAAGTCCCTGTCGTA 26435
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 37353 ACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTC 37412
||||||||| | |||||| | | || || ||| ||||| | | | || | |||
Sbjct 24988 ACCTTTACTAACAGGAGAACCTTCGTAAGTGGAATACGGTCCTTCCACCTCGGCCAATTC 25047
Query 37413 GCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTT 37472
||||||| || | ||||||||||| | || |||||||| || | ||||| ||
Sbjct 25048 ACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACATGCG 25107
Query 37473 TGCTTCTTCGCTATC-GAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAA 37531
||||| |||||||| | |||| | ||| || ||||| |||| || | ||||| |
Sbjct 25108 AGCTTCCTCGCTATCATACGGCAT-TCTCAACAAAATAAAAGCATCGGCAAGGCCCTGTA 25166
Query 37532 CACCGATACCTATGGGTCTATGTTTCTTATTAGA 37565
|||||||| || ||||||||| || |||| ||
Sbjct 25167 TTCCGATACCGATCGGTCTATGTCTCATATTCGA 25200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468370157533200
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