Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1220 293 2e-74 seq9764 187 2e-42 >seq1220 Length=9943 Score = 293 bits (324), Expect = 2e-74 Identities = 648/958 (68%), Gaps = 29/958 (3%) Strand=Plus/Plus Query 11268 TAAAAATTATTAATTAAAAATCTATATCCGTAGAAAATATATTCTCTT---CTTTATTTG 11324 ||||||| | |||||||| || ||| |||| |||| ||| || | | | ||| Sbjct 7099 TAAAAATAA--AATTAAAAGTCAGCATCTGTAGTGAATACATTATCCAAGACATCACTTG 7156 Query 11325 TAAACACCCCCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTT 11384 ||| | || | ||||| ||||| | |||| | ||| ||||| ||||| ||||| | Sbjct 7157 TAA---CGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCT 7213 Query 11385 CTAGTGATAT-ATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAA 11443 | ||||| ||| || ||||| ||| ||||| | ||| | |||||||||||| Sbjct 7214 CCGTGGATATGATATTC-ATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAA 7272 Query 11444 CCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAA 11503 |||| || | |||||||| || ||||| ||||| ||||||||| ||| | || Sbjct 7273 CCTAGTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAG 7332 Query 11504 TTCATACCTAT-AAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAAC 11562 ||||| ||||| ||| | || || | ||| | || | |||||| | || || | ||| Sbjct 7333 TTCATTCCTATTAAGCTA-ACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAAC 7391 Query 11563 CGCATC--AATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTA 11620 ||| || || | |||||||| | | | || || ||| |||| | || | Sbjct 7392 CGCGTCGCAAATAATATCGACGATTCGAGAT--TTCGACGGTTTTTGTACAATATAAGAA 7449 Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 || | ||| || ||||| ||| |||| || ||||| || | ||||| |||||| || Sbjct 7450 AATAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAG 7509 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || |||| || ||||| | ||||| ||||| | |||||| || | |||||| || Sbjct 7510 AAAGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCG 7569 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTG 11797 || ||||| ||||| || || || || || ||||||| | || || | ||| Sbjct 7570 GAGAAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCT 7629 Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857 || || ||||||| |||||| | |||||| || |||||| | ||||||| Sbjct 7630 TTACTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCT 7689 Query 11858 ATAGCGTTAAATAAATGCATTTTTTCTATATTA--TCTCTTACATATGTATCTATTAATA 11915 || || || |||||| ||| ||||| | | || || | ||| || || || | | Sbjct 7690 ATCGCATTGAATAAAA--ATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCA 7747 Query 11916 AACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTG 11975 || |||||||| ||||||||| || || || |||||||| || || ||||| || | Sbjct 7748 TGCTGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGG 7807 Query 11976 CCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCAT 12035 | || | || || || | ||| | |||| | | ||| ||||| || || |||| Sbjct 7808 CTTCAGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCAT 7867 Query 12036 CACTAGATGCA---AAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA 12092 | |||||| |||||||| | | | ||| ||||| | | | ||||| | |||| Sbjct 7868 CG---GATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTA 7924 Query 12093 ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTG 12152 |||||| ||||| ||||| |||| | ||||||||||||||||| |||||||| | Sbjct 7925 ATTTATTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGG 7984 Query 12153 CCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210 | | | |||||| || | ||| ||||| |||| | || ||||||| ||| || Sbjct 7985 CTTCGGCTTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAA 8042 >seq9764 Length=88291 Score = 187 bits (206), Expect = 2e-42 Identities = 388/572 (68%), Gaps = 7/572 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||||| |||||| |||| || | ||| ||||| | |||||||||||| || Sbjct 27303 TCGACAGTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTC 27362 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | || |||| ||||| ||||| || || || |||| |||| || Sbjct 27363 TTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTC 27422 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 || | | || ||| || ||||| ||||| || || || || | ||||| || Sbjct 27423 TCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGG 27482 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | |||| || | ||| || ||||| || ||||| || || | || |||| ||| Sbjct 27483 TTAATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCC 27542 Query 37030 GGTAAATCTA-AATGTT--GAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086 |||| | ||| || | || |||||| || | || |||||| ||||| Sbjct 27543 GGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCG 27602 Query 37087 TTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAA 37146 | | ||| | || |||| | || || | ||| || || |||| || ||||| || Sbjct 27603 TCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAAT 27662 Query 37147 TCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTA 37206 |||||||| || || | ||| || || || || ||| || ||||||| ||| || ||| Sbjct 27663 TCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTA 27722 Query 37207 TTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTC 37266 || | ||| ||||||| || || || || ||||| ||||||| || | |||||| Sbjct 27723 TTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTT 27782 Query 37267 AATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-GTT 37325 | |||||| || || || ||||| | | |||||||||||| ||||||||| ||| Sbjct 27783 ACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATCTGTTGGCGTT 27842 Query 37326 -CTTTAACCACATATCATATTGTAGAATACCT 37356 | || ||||||||| ||||||| ||||||| Sbjct 27843 ACGTT--CCACATATCGTATTGTAAAATACCT 27872 Score = 168 bits (186), Expect = 6e-37 Identities = 384/572 (67%), Gaps = 7/572 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||||| |||||| |||| || | ||| || || | ||||||||||| || Sbjct 24167 TCGACAGTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTC 24226 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | || |||| ||||| ||||| || || || |||| |||| || Sbjct 24227 TTCAAACCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTC 24286 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 || | | || ||| || ||||| ||||| || || || || | ||||| || Sbjct 24287 TCGACGTGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGG 24346 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | |||| || | ||| || ||||| || ||||| || || | || |||| ||| Sbjct 24347 TTAATAATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCC 24406 Query 37030 GGTAAATCTA-AATGTT--GAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086 |||| | ||| || | || |||||| || | || |||||| ||||| Sbjct 24407 GGTATTCCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCG 24466 Query 37087 TTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAA 37146 | | ||| | || |||| | || || | ||| || || | || || ||||| || Sbjct 24467 TCGTCCCAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAAT 24526 Query 37147 TCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTA 37206 |||||||| || || | ||| || || || || ||| || ||||||| ||| || ||| Sbjct 24527 TCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTA 24586 Query 37207 TTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTC 37266 || | ||| ||||||| || || || || ||||| ||||||| || | |||||| Sbjct 24587 TTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTT 24646 Query 37267 AATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-GTT 37325 | |||||| || || || ||||| | | |||||||||||| || |||||| ||| Sbjct 24647 ACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATTTGTTGGCGTT 24706 Query 37326 -CTTTAACCACATATCATATTGTAGAATACCT 37356 | || ||||||||| ||||||| ||||||| Sbjct 24707 ACGTT--CCACATATCGTATTGTAAAATACCT 24736 Score = 116 bits (128), Expect = 3e-21 Identities = 405/626 (65%), Gaps = 12/626 (2%) Strand=Plus/Plus Query 38014 TCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTA 38073 || ||||||| |||||| || || |||| ||| | ||| ||| ||||| | | | Sbjct 25816 TCGACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGC 25875 Query 38074 TATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCAT 38133 ||||||| | || |||||| | || | | ||||| || ||||| |||||||| Sbjct 25876 GCTTCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAG 25935 Query 38134 GGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTA 38193 || || | ||||| | | ||||| || || || | || || |||| || || | Sbjct 25936 GGCTCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGC 25995 Query 38194 ACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCG 38253 | || ||||| | | |||| ||| || || | ||| || ||| |||||| | ||| Sbjct 25996 GCCGTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCG 26055 Query 38254 GATATATAAGTACCCTTAGCTCGTATATT----ACTTATCGACAATCCTATTCCACCTGC 38309 | |||||||| || || |||| |||||| || | | | || || || || || Sbjct 26056 GCAATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTT----ACGCCGATACCGCCGGC 26111 Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAA-CGTATCAAATATACCTTCTATACTGTCAT 38368 || || || | |||||||| || | | ||| || || || || ||| | Sbjct 26112 TGACTTCGAAATGTAGGCGCATTGCGCCAAGCAGGTGAAA-ATCCCCTCGATCGAGTCTT 26170 Query 38369 CCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATA 38428 | || | | || || ||| | ||||| ||| || | || || | Sbjct 26171 CGGGCATCATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTGTAGCCGCCGAGAACA 26230 Query 38429 ATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACAT 38488 || ||| || || | || || | ||||| | ||||| || ||||| || || Sbjct 26231 GAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACGG 26290 Query 38489 CATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTT 38548 |||| ||||| ||||||| || || | || ||||| ||| ||||||||||| || |||| Sbjct 26291 CATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTTT 26350 Query 38549 CTATTATTTTATTATT-CTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAA 38607 | | || ||| ||| || |||| ||||||||| | ||||| ||||| | || || Sbjct 26351 CGACGATCTTACCATTAATGCGTAAG-AGATACGATCTCTCTAAGGTTTTAAAGCCGAAG 26409 Query 38608 TAACTATATGAATAATCTCTATCGTA 38633 ||| | || ||| | || || ||||| Sbjct 26410 TAATTGTAGGAAAAGTCCCTGTCGTA 26435 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 37353 ACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTC 37412 ||||||||| | |||||| | | || || ||| ||||| | | | || | ||| Sbjct 24988 ACCTTTACTAACAGGAGAACCTTCGTAAGTGGAATACGGTCCTTCCACCTCGGCCAATTC 25047 Query 37413 GCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTT 37472 ||||||| || | ||||||||||| | || |||||||| || | ||||| || Sbjct 25048 ACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACATGCG 25107 Query 37473 TGCTTCTTCGCTATC-GAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAA 37531 ||||| |||||||| | |||| | ||| || ||||| |||| || | ||||| | Sbjct 25108 AGCTTCCTCGCTATCATACGGCAT-TCTCAACAAAATAAAAGCATCGGCAAGGCCCTGTA 25166 Query 37532 CACCGATACCTATGGGTCTATGTTTCTTATTAGA 37565 |||||||| || ||||||||| || |||| || Sbjct 25167 TTCCGATACCGATCGGTCTATGTCTCATATTCGA 25200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468370157533200