Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1220 334 1e-86 seq9764 163 4e-35 >seq1220 Length=9943 Score = 334 bits (370), Expect = 1e-86 Identities = 631/920 (69%), Gaps = 11/920 (1%) Strand=Plus/Plus Query 35856 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTA 35915 |||| || | |||||||||||| || || |||||| ||||| ||||||||||| || Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 35916 ATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCA 35975 ||||| | | ||| ||||| ||||||||| | |||||||| ||||| | | || | Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 35976 ATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCA 36035 ||| | ||||| || ||||||||||| ||||| |||| || || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 36036 TTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGT 36095 ||||||| | |||| || | || | |||||||| ||||| || || ||||||| Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 36096 CTGTTATAATA--GAT-ATTACTG-TTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 36151 | |||||| || ||| | |||| | | || ||||||| | | ||| Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTG--TACAATATAAGA--AAAT 7452 Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211 | || || || || || | || | || || || | |||||||| ||||| || Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512 Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 36271 || || || ||||| || || | |||||| | |||||| || || ||||| ||| || Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572 Query 36272 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACTGTC 36330 |||||||||||||| ||||| || || || | | | ||| || | || | || | Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632 Query 36331 ATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 || ||||| | | ||||| | || || || ||| ||||| | ||| ||||| Sbjct 7633 CTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATC 7692 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 ||||| || | | | | ||| || || || | | ||| || ||||| | | || Sbjct 7693 GCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTG 7752 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 |||||||| |||||| || ||||| || |||||||| ||||| ||||| | || || Sbjct 7753 TACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCA 7812 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 || | || || ||| || ||| ||||| | | ||||||||| || ||||| || Sbjct 7813 GTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGAT 7872 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTC 36628 || || ||||| ||||| || | ||| ||||||| | | |||| |||| ||||||| Sbjct 7873 GCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTC 7932 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 |||| || |||||| |||||| ||| |||||||| ||||||||| || || || || Sbjct 7933 CAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCT 7992 Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGA 36748 | ||| || || ||| || || |||||| ||||| |||| |||||||| || || Sbjct 7993 TGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGA 8052 Query 36749 TTTTTTGCAAGGATTGGTTC 36768 |||| | ||| | |||||| Sbjct 8053 TTTTCTTTAAGAAGTGGTTC 8072 >seq9764 Length=88291 Score = 163 bits (180), Expect = 4e-35 Identities = 351/524 (67%), Gaps = 3/524 (1%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 |||||||| || || | || |||||||| | |||||| ||||||||||| || | | Sbjct 27309 GTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAA 27368 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || |||| ||||| ||||| || || || | ||||| || | | | Sbjct 27369 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 27428 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 27429 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 27488 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 27489 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 27548 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 | ||||||| || || |||| || || | ||| |||||| || || || | | Sbjct 27549 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 27608 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| ||||| | | | | | ||||| ||||||| || || ||||||||| Sbjct 27609 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCA 27668 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 27669 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 27728 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 27729 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 27788 Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 65359 | | | ||| || |||||| | ||||| ||| ||||| Sbjct 27789 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATC 27832 Score = 152 bits (168), Expect = 7e-32 Identities = 348/523 (67%), Gaps = 3/523 (1%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 |||||||| || || | || |||||||| | ||| || ||||||||||| || | | Sbjct 24173 GTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAA 24232 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || |||| ||||| ||||| || || || | ||||| || | | | Sbjct 24233 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 24292 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 24293 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 24352 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 24353 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 24412 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 | ||||||| || || |||| || || | ||| |||||| || || || | | Sbjct 24413 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 24472 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| ||||| | | | | | ||||| | ||||| || || ||||||||| Sbjct 24473 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCA 24532 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 24533 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 24592 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 24593 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 24652 Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 65358 | | | ||| || |||||| | ||||| ||| |||| Sbjct 24653 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGAT 24695 Score = 134 bits (148), Expect = 2e-26 Identities = 319/473 (67%), Gaps = 18/473 (4%) Strand=Plus/Plus Query 65430 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 65489 || ||||||||| ||| || | ||||||||| ||||| || || | ||||| | || Sbjct 25022 TACGGTCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTC 25081 Query 65490 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 65549 ||||| |||| | |||| | |||||| ||||||| | || | || | | Sbjct 25082 TCGAAAATCTGCAAGTTTAACATGCGAGCTTCCTCGCTATCATACGGCATTCTCAACAAA 25141 Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609 ||||| || || || | || || | || |||||||| |||||||||||| |||| || Sbjct 25142 ATAAAAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGAC 25201 Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 65666 ||| ||| || || |||||||| ||||| ||||| || || || | || | || Sbjct 25202 GTTTTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTG 25261 Query 65667 ACAATTACTTTGACCACATCCTTC-AGTTTGAGAAAATC--AAATC-GCTCATC---TAT 65719 || || ||| || | |||| ||||| | ||||| | || | ||| | | Sbjct 25262 ACGAT---TTTCGTGACGTTCTTCAAGTTTTCG-AAATCGTACGTCTTCCTATCCGGTTT 25317 Query 65720 TACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC--ATTAGCATCC 65777 ||| ||||| |||| |||| || || ||||||||||| || | || || | | | Sbjct 25318 TACGAACATATTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGA--C 25375 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | ||| | || ||||| ||||| | || |||| ||||| ||||| | || ||||| Sbjct 25376 GTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGG 25435 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 65890 || || || || || || ||||| || || ||| | || ||||| ||||| Sbjct 25436 TTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTC 25488 Score = 129 bits (142), Expect = 8e-25 Identities = 410/632 (65%), Gaps = 18/632 (3%) Strand=Plus/Plus Query 66060 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGT 66119 || ||||||||||| | || || |||||||| || ||| ||||| || | | | Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 66120 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGT 66179 || ||| | || |||||||| || | || | ||| ||| ||||| ||||| || Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 66180 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 66239 |||||||| ||||| | | |||| |||| |||||||| || ||||| | ||| | || Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCC 25998 Query 66240 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAG 66299 || ||||| |||| || | ||| || | | ||| |||||| || || || |||| Sbjct 25999 GTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCA 26058 Query 66300 ATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 66359 ||||| |||| | || | ||||| | || || || || || || || Sbjct 26059 ATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTC 26118 Query 66360 GAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATC---CAT 66415 || || | |||||| | || | | | | || ||||| || || || ||| Sbjct 26119 GAAATGTAGGCGCATTGCGCCAAGCAGGTGA-AAATCCCCTCGATCGAGTCTTCGGGCAT 26177 Query 66416 CATGTTAAGTA-----GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470 ||| || | ||| | |||| ||||||| ||| |||| || Sbjct 26178 CATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTG-----TAG---CCGCCGAGAAC 26229 Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530 | || ||| |||||||||||| || | || || || |||||| || || ||| | Sbjct 26230 AGAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACG 26289 Query 66531 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590 | || ||||| || ||||| || || || ||||| | ||| || ||||| ||| Sbjct 26290 GCATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTT 26349 Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650 || |||||||| || || || | || ||| | || || |||||||| || || Sbjct 26350 TCGACGATCTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTTTTAAAGCCGAAG 26409 Query 66651 TAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682 || ||||| |||||||| | ||||||||||| Sbjct 26410 TAATTGTAGGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657955561840200