Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq9911 122 9e-23 seq22504 111 2e-19 seq9764 98.7 1e-15 seq22544 95.1 1e-14 >seq9911 Length=12084 Score = 122 bits (134), Expect = 9e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || || || || || || | || ||||||||||| ||||||||||| Sbjct 5264 CCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAA 5323 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| |||||| |||||| || || || || Sbjct 5324 AGAGTACGTCCA-TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGG 5382 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| |||||| ||||| | ||| | || || | ||||||| Sbjct 5383 GATACCTTCTTTATC-TTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCA 5441 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | |||||| || || || || || |||||||| |||||| Sbjct 5442 CTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCATA 5491 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || ||||| |||||||| | ||||| |||||||| || |||||||| Sbjct 4352 CCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAA 4411 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || | ||||| || ||| | |||| ||||||||| || |||||| Sbjct 4412 AGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGT 4471 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| ||||||| ||| | | ||| | ||||| | || ||||| Sbjct 4472 ATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACT 4531 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | |||||||| || |||||||| Sbjct 4532 TCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || || || || | ||||| || || || |||||||| || ||||| | Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATC--TG 4865 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || | | ||| ||||| | || || |||||| | |||| |||||| |||||||||| Sbjct 4866 ATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAG 4925 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||| ||||| ||| | |||| ||| | | ||| | || || | || ||| Sbjct 4926 GGATTCCTTCCTTGTC-TTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCC 4984 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || |||| || | ||||| || || || ||||| || || || |||||| Sbjct 4985 ACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCATA 5035 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || ||||| || | || || || | ||||| || |||||||| || ||||| Sbjct 4121 TGGCCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCT 4180 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | || | | ||||| | ||||| || ||| |||||| ||| |||||||| ||| Sbjct 4181 GAAAGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGA 4240 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTC 139713 || || |||||||| || ||| |||| | |||| | | ||| | ||| || | || || Sbjct 4241 GGAATACCTTCTTTATCC-TGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTC 4299 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || || | || | || || || || | || || || |||||||||||| || Sbjct 4300 TACTTCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCATACCT 4354 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | ||| || || || | || || ||||| |||||||||||||| Sbjct 4580 CCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGAT 4639 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | ||||||||||||| | || | ||| || ||||| |||||| Sbjct 4640 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGT 4699 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| || | || | ||| || | || | || || | || ||||| Sbjct 4700 ATTCCTTCTTTGTC-TTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCAC 4758 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || | ||||| || || |||||||| Sbjct 4759 TTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 || || || ||||| |||| ||||| || ||||| ||||||||||| | | | | | Sbjct 5045 AATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATC--TGAAAGGGTAC 5102 Query 139607 GAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 139664 || ||||| | ||||||||||| | || || ||||| ||||| || || || |||| Sbjct 5103 GACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTT 5162 Query 139665 CTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGG 139724 |||| || ||| || ||||| | ||| | || || | || || || || | | Sbjct 5163 CTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAG 5222 Query 139725 TCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | | ||||| || || || ||||| || || ||||||||| Sbjct 5223 TGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCATA 5263 >seq22504 Length=90246 Score = 111 bits (122), Expect = 2e-19 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 |||||||| || ||||| | || || || || || || |||||||| || | | | Sbjct 25749 AAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCG--ATAGAGTAC 25692 Query 139607 GA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 139664 || |||||| | |||||||||||| | || ||||||||||||||||| || || |||| Sbjct 25691 GACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTT 25632 Query 139665 CTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACG 139723 | ||||| ||| |||| | |||| | ||| | || |||| || || ||||| | | Sbjct 25631 CCTTGTC-TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGG 25573 Query 139724 GTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || || || || | ||||| ||||| |||||||| Sbjct 25572 GTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532 Score = 107 bits (118), Expect = 2e-18 Identities = 141/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||||| |||||||| || ||||| | || || ||||| ||||| |||||||| Sbjct 21213 CCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCG-- 21156 Query 139598 ATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || | | ||| |||||| | |||||||||||| | || ||||||||||||||||| | Sbjct 21155 ATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTG 21096 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||| ||||| ||| |||| | |||| | ||| | || |||| || || Sbjct 21095 GGATACCTTCCTTGTC-TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCA 21037 Query 139715 ACCTCAACGGT 139725 ||||| | ||| Sbjct 21036 ACCTCGAGGGT 21026 >seq9764 Length=88291 Score = 98.7 bits (108), Expect = 1e-15 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 153627 TTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACT 153686 || |||||||||||||| | || ||||| ||| ||||||| || ||| | ||| Sbjct 25328 TTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACG 25387 Query 153687 ATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACT-TTGATTGCTTTTGCG 153745 || || | || || ||||| | ||| ||| | | || | || ||| |||||||| || Sbjct 25388 ATCTCGGTGCATAAGTTGCTACTTTTGATC-GTTCCCAGGTTCTGTTGGTTGCTTTTACG 25446 Query 153746 GTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTG 153793 || |||||||||||||| |||||||| || || |||||||| |||| Sbjct 25447 ATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCACTTG 25494 >seq22544 Length=59602 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 58286 CGCCTCAATGTTGCCCAAATCGCCGACGTGTCGCACCGCAGCGTTAGGCGCGCCATGATT 58345 ||| || ||||| ||||||||||||||||| || || | || | || |||| |||| Sbjct 43436 CGCTTCGATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATC 43495 Query 58346 GCTACCCGTAGGATTGAAATGTTCGCCGGCCGAAGTGCATCCGTTACTCATATCGCCAAA 58405 ||| ||| ||||| || ||||||| ||| |||| ||||| | ||||||| || Sbjct 43496 CTTACTGTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAA 43555 Query 58406 TTCGTGCACGTGAAAGCCGTGCAGTCCTTT 58435 |||||| | ||| || ||||| || ||||| Sbjct 43556 TTCGTGAATGTGGAATCCGTGAAGGCCTTT 43585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495900267876000