Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1220 322 7e-83 seq9764 179 5e-40 >seq1220 Length=9943 Score = 322 bits (356), Expect = 7e-83 Identities = 618/904 (68%), Gaps = 13/904 (1%) Strand=Plus/Plus Query 49658 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCA 49717 |||| || | |||||||||||| || || |||||| ||||| |||||||| || ||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 49718 ATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 49777 ||||| | | ||| |||||||| |||||| | |||||||| ||||| | | || | Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 49778 ATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCA 49837 ||| | ||||| || ||||||||||| ||||| |||| || || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 49838 TTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCAT 49897 ||||||| | |||| || | || | |||||||| ||||| || || ||||| | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 49898 CTGTTATAATAGATCTAACGGTTTC---TTCACTCGGTGGATG--CAATAAATGTTTAAA 49952 | |||||| || | || || || |||| || ||||| | | ||| Sbjct 7397 CGCAAATAATA--TCGA-CGATTCGAGATTTCGACGGTTTTTGTACAATATAAGA--AAA 7451 Query 49953 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAA 50012 | || || || || || | |||| || || || | |||| ||| ||||| || Sbjct 7452 TAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAA 7511 Query 50013 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGA 50072 || || || ||||| || || | |||||| | |||||| || || ||||| || || Sbjct 7512 AGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGA 7571 Query 50073 AAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG-CTGT 50131 ||||| |||||||| ||||| || || || || | | ||| || | | || || | Sbjct 7572 GAAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTT 7631 Query 50132 CATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || ||||| | | ||||| | || || || ||| ||||| | |||||||| Sbjct 7632 ACTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTAT 7691 Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249 ||||| || | | | | ||| || || || | | ||| || || || | | || Sbjct 7692 CGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCT 7751 Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309 |||||||| |||||| || ||||| || || ||||| ||||| ||||| | || || Sbjct 7752 GTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTC 7811 Query 50310 GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACT 50369 || | || || ||| || ||| ||||| | | ||||||||| || ||||| || Sbjct 7812 AGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGA 7871 Query 50370 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT 50429 || || ||||| ||||| || | ||| ||||||||| | |||| |||| |||||| Sbjct 7872 TGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATT 7931 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||||| || |||||| |||||| |||||||||||| ||||||||| || || || || Sbjct 7932 CCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGC 7991 Query 50490 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGG 50549 | ||| || || ||| || || |||||| |||||||||| |||||||| || || Sbjct 7992 TTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGG 8051 Query 50550 ATTT 50553 |||| Sbjct 8052 ATTT 8055 >seq9764 Length=88291 Score = 179 bits (198), Expect = 5e-40 Identities = 378/563 (67%), Gaps = 3/563 (1%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 |||||||| || || | || |||||||| | |||||| ||||||||||| || | | Sbjct 27309 GTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAA 27368 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| ||||||||||| || || || | ||||| || | | | Sbjct 27369 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 27428 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 27429 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 27488 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 27489 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 27548 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 | ||||||| || || |||| || || | ||| |||||| || || || | | Sbjct 27549 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 27608 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | ||| ||||| | | | | | ||||| ||||||| || || ||||||||| Sbjct 27609 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCA 27668 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 ||||| || | | ||||| || || || || ||||| | ||||| |||||||| Sbjct 27669 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 27728 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 || |||||||| || || || || ||||||||||| | | |||| |||||| | ||| Sbjct 27729 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 27788 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 | | ||| || |||||| | ||||||||| ||||| | || || ||| Sbjct 27789 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATCTGTTGGCGTTACGTTC 27848 Query 79255 CAAAGATCATATTGTAGAATACC 79277 || | ||| ||||||| |||||| Sbjct 27849 CACATATCGTATTGTAAAATACC 27871 Score = 167 bits (184), Expect = 3e-36 Identities = 375/563 (67%), Gaps = 3/563 (1%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 |||||||| || || | || |||||||| | ||| || ||||||||||| || | | Sbjct 24173 GTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAA 24232 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| ||||||||||| || || || | ||||| || | | | Sbjct 24233 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 24292 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 24293 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 24352 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 24353 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 24412 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 | ||||||| || || |||| || || | ||| |||||| || || || | | Sbjct 24413 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 24472 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | ||| ||||| | | | | | ||||| | ||||| || || ||||||||| Sbjct 24473 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCA 24532 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 ||||| || | | ||||| || || || || ||||| | ||||| |||||||| Sbjct 24533 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 24592 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 || |||||||| || || || || ||||||||||| | | |||| |||||| | ||| Sbjct 24593 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 24652 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 | | ||| || |||||| | ||||||||| |||| | || || ||| Sbjct 24653 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATTTGTTGGCGTTACGTTC 24712 Query 79255 CAAAGATCATATTGTAGAATACC 79277 || | ||| ||||||| |||||| Sbjct 24713 CACATATCGTATTGTAAAATACC 24735 Score = 134 bits (148), Expect = 2e-26 Identities = 338/506 (67%), Gaps = 16/506 (3%) Strand=Plus/Plus Query 79275 ACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTC 79334 ||| |||||| | || ||| ||| || ||| ||||||||| ||||| ||||| Sbjct 24988 ACCTTTACTAACAGGAGAACCTTCGTAAGTGGAATACGGTCCTTCCACCTCGGCCAATTC 25047 Query 79335 ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 79394 |||||| ||||| || || | ||||| | || |||||||||| | || | | Sbjct 25048 ACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACATGCG 25107 Query 79395 TGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 79454 ||||| ||||||| | || | || | |||||| || || || | || || | Sbjct 25108 AGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGGCCCTGTAT 25167 Query 79455 ACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATA 79514 || |||||||| |||||||||||| |||| || ||| ||| || || |||||||| Sbjct 25168 TCCGATACCGATCGGTCTATGTCTCATATTCGACGTTTTGCTTTCGGGTATCGGATAATA 25227 Query 79515 ATTAATATCTATAATTTTATTGAGATT---CCTGACTATTACTTTGACCACATCCTTTAG 79571 ||||| ||||| || || || | || | |||| ||| |||| || | || Sbjct 25228 GTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGAC--GTTCTTCAAG 25285 Query 79572 TTTGAGAAAATC--AAATCGTCC-ATC---TATTACAAACATGTTCAACGCGACAGATGC 79625 ||| | ||||| | || ||| ||| | |||| ||||| |||| || | || || Sbjct 25286 TTTTCG-AAATCGTACGTCTTCCTATCCGGTTTTACGAACATATTCACGGCAATCGACGC 25344 Query 79626 CAGATTACAAACGGCTACCTC--ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGG 79683 ||||||||||| || | || || | | || ||| | || || || ||||| | | Sbjct 25345 TAGATTACAAACTGCAATTTCGTCTTTGGA--CGTATACTCTACGATCTCGGTGCATAAG 25402 Query 79684 TTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 79743 || |||| || || ||||| | || ||||| || || || || || || ||||| Sbjct 25403 TTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCAAGCGTCCTTG 25462 Query 79744 TAAAGAATGAACGGAGTACCAGTTTC 79769 || || ||| | || ||||| ||||| Sbjct 25463 TAGAGCATGTAAGGGGTACCGGTTTC 25488 Score = 125 bits (138), Expect = 1e-23 Identities = 412/635 (65%), Gaps = 24/635 (4%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 || ||||||||||| | || || |||||||| || ||| | ||| || | | Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || ||| | || |||||||| || | || | ||| ||| ||||| | ||||| || Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 80059 TCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 80118 |||||||| ||||| | | ||||||| | |||||||| || ||||| | ||| | || Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCC 25998 Query 80119 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAG 80178 || ||||| |||| || | ||| || | | ||| |||||| || || || |||| Sbjct 25999 GTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCA 26058 Query 80179 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 80238 ||||| |||| | || | ||||| | || || || || || || || Sbjct 26059 ATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTC 26118 Query 80239 GAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTAT----------GCTAT 80287 || || | |||||| | || | | | | || ||||| || | || Sbjct 26119 GAAATGTAGGCGCATTGCGCCAAGCAGGTGA-AAATCCCCTCGATCGAGTCTTCGGGCAT 26177 Query 80288 CATCAATCATGTTAAGTA-GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 80346 |||||| | | ||| | ||| | |||| ||||||| ||| |||| Sbjct 26178 CATCAA-GAGG--AAGCATGAAGAAAGCTGAGGTTTTGGTG-----TAG---CCGCCGAG 26226 Query 80347 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA 80406 || | || ||| |||||||||||| || | || || || |||||| || || ||| Sbjct 26227 AACAGAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATA 26286 Query 80407 GCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGT 80466 | | || ||||| || ||||| || || || ||||| | ||| || ||||| Sbjct 26287 ACGGCATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGC 26346 Query 80467 CTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCA 80526 ||||| |||||||| ||| || || | || ||| | || || |||||||| || Sbjct 26347 CTTTCGACGATCTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTTTTAAAGCCG 26406 Query 80527 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 || || ||||| |||||||| | ||||||||||| Sbjct 26407 AAGTAATTGTAGGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718031726404200