Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 351 9e-92
>seq1220
Length=9943
Score = 351 bits (388), Expect = 9e-92
Identities = 640/924 (69%), Gaps = 16/924 (2%)
Strand=Plus/Plus
Query 13570 TAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCA 13629
||||||| | |||||| ||||| | |||| |||||||||| |||||||||||||| |||
Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216
Query 13630 GTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTA 13689
||||| | | |||||||||||||||||| |||| || | ||||| ||||||||||
Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276
Query 13690 GTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCA 13749
|||| | |||||| ||||| | ||| |||||||| ||| ||| | | || ||||
Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336
Query 13750 TACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCT 13809
| ||||||| | ||||| | || ||| | ||| |||| || || || || |
Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396
Query 13810 CTTTTATAATAATTGTAATAATCTC-ATTAGAAGGAGGATATTTTAGATGTTTA-AAAAT 13867
| |||||| | | | || ||| | | | | || || | | | |||||
Sbjct 7397 CGCAAATAATA--TCGACGATTCGAGATTTCGACG--GTTTTTGTACAATATAAGAAAAT 7452
Query 13868 --TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13925
||| || ||||| ||| |||| | || ||||| | || | ||| || || ||
Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512
Query 13926 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAA 13985
|||| || ||||| | ||||| ||||| |||||||| |||| |||||| |||||
Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572
Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045
||||| ||||| || |||||||| || |||| ||| || || || || | || | |||
Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632
Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105
| ||||||| ||||| | || |||||| | || | |||||| ||
Sbjct 7633 CTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATC 7692
Query 14106 GCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGC 14163
||||| |||||| |||| |||||||| | | ||| || | || |||||||| | ||
Sbjct 7693 GCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATAT--ACGTTTCAATAAGCATGC 7750
Query 14164 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTT 14223
| |||||||| || || || || || || || |||||||| ||||| || | ||||
Sbjct 7751 TGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTT 7810
Query 14224 CCGACCATTGTACTTCC-GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14282
| | ||| || || || ||||| | ||| ||| |||||||||||| || |||||
Sbjct 7811 CAGTTACTTGAACCTCTTGACTAAAA-CGTTCCACCAGATTTTCATTAACGATTCCATCG 7869
Query 14283 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT 14342
|| || ||||||||||| | || ||| ||||| | | ||| |||| | | | |||
Sbjct 7870 GATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTA 7929
Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402
||||||| || ||| |||| | ||||||||| || ||||||||| || |
Sbjct 7930 TTCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCG 7989
Query 14403 GCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TCGA 14461
|||| ||| || | |||| || || |||| ||| || ||||| ||||||| |
Sbjct 7990 GCTTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTG 8049
Query 14462 AGATGTTTCTTTAAGAATTGGTTC 14485
||| |||||||||||| ||||||
Sbjct 8050 GGAT-TTTCTTTAAGAAGTGGTTC 8072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479569659777000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |