Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1220 336 3e-87 seq9764 159 5e-34 >seq1220 Length=9943 Score = 336 bits (372), Expect = 3e-87 Identities = 620/903 (69%), Gaps = 11/903 (1%) Strand=Plus/Plus Query 41763 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCA 41822 |||| || | |||||||||||| || || |||||| ||||| ||||| || || ||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 41823 ATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 41882 ||||| | | ||| |||||||| |||||| | |||||||| ||||| | | || | Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 41883 ATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCA 41942 ||| | ||||| || |||| ||||| ||||| |||| || || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 41943 TTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGT 42002 ||||||| | |||| || | || | |||||||| ||||| || || ||||||| Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 42003 CTGTTATAATA--GATCTTACTG--TTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 42058 | |||||| || | | |||| | | || ||||||| | | ||| Sbjct 7397 CGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTG--TACAATATAAGA--AAAT 7452 Query 42059 ATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118 | || || || || || | |||| || ||||| | |||||||| ||||| || Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512 Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178 || || || ||||| || || | |||||| | |||||| || || ||||| ||| || Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572 Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACTGTC 42237 ||||| |||||||| ||||| || || || | | | ||| || | || | || | Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632 Query 42238 ATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 || ||||| | | ||||| | || || || ||| ||||| | |||||||| Sbjct 7633 CTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATC 7692 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 ||||| || | | | | ||| || || || | | ||| || || || | | || Sbjct 7693 GCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTG 7752 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 |||||||| |||||| || ||||| || || ||||| ||||| ||||| | ||| || Sbjct 7753 TACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCA 7812 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 || || || || ||| || ||| ||||| | | |||||| || || ||||| || Sbjct 7813 GTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGAT 7872 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTC 42535 || || ||||| ||||| || | ||| ||||||| | | ||||| |||||||||||| Sbjct 7873 GCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTC 7932 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 |||| || |||||| |||||| |||||||||||| |||||||| || ||||| || Sbjct 7933 CAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCT 7992 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGA 42655 | ||| || || ||| ||||| |||||| |||||||||| |||||||| || ||| Sbjct 7993 TGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGA 8052 Query 42656 TTT 42658 ||| Sbjct 8053 TTT 8055 >seq9764 Length=88291 Score = 159 bits (176), Expect = 5e-34 Identities = 344/513 (67%), Gaps = 6/513 (1%) Strand=Plus/Plus Query 70821 TGCGGCT---TTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTA 70877 ||||||| ||||| | |||||| ||||| || || || | ||| |||| ||||| Sbjct 27326 TGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAACCTTTCTTCCACCCGTA 27385 Query 70878 AAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTG 70937 ||||| || || || | || ||||| | | | ||| | ||||| |||||| Sbjct 27386 GAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACGTGTAGATTCAGCGACTG 27445 Query 70938 ACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAAT 70997 ||| ||||||||||| || || | || || || || || || ||| | | || Sbjct 27446 ACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGAT 27505 Query 70998 TTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAAT 71054 |||||| | ||||| || | ||| ||||| || || | | ||||||| || Sbjct 27506 TTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTAT 27565 Query 71055 GGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGT 71114 || |||| || || | ||| ||| || || || || | ||| | | ||| ||||| Sbjct 27566 CGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGT 27625 Query 71115 TAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGT 71174 | | | | | ||||| ||||||| || || |||||||||||||| || | | || Sbjct 27626 AAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGT 27685 Query 71175 GTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGA 71234 ||| || || || |||||||| | || || |||||||| || |||||||| || || Sbjct 27686 GTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGA 27745 Query 71235 TGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATC 71294 || |||||||||||||| | | || | |||||| | ||||||| ||| || | Sbjct 27746 AGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCGC 27805 Query 71295 TTTTAGAGATTCCCAATTCCAAAGATCCGATGG 71327 ||||| | ||||| ||| ||||| | ||| Sbjct 27806 TTTTAATGCGCTCCAATCCCATAGATCTGTTGG 27838 Score = 147 bits (162), Expect = 3e-30 Identities = 313/466 (67%), Gaps = 6/466 (1%) Strand=Plus/Plus Query 70821 TGCGGCT---TTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTA 70877 ||||||| ||||| | ||| || ||||| || || || | ||| |||| ||||| Sbjct 24190 TGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAACCTTTCTTCCACCCGTA 24249 Query 70878 AAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTG 70937 ||||| || || || | || ||||| | | | ||| | ||||| |||||| Sbjct 24250 GAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACGTGTAGATTCAGCGACTG 24309 Query 70938 ACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAAT 70997 ||| ||||||||||| || || | || || || || || || ||| | | || Sbjct 24310 ACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGAT 24369 Query 70998 TTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAAT 71054 |||||| | ||||| || | ||| ||||| || || | | ||||||| || Sbjct 24370 TTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTAT 24429 Query 71055 GGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGT 71114 || |||| || || | ||| ||| || || || || | ||| | | ||| ||||| Sbjct 24430 CGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGT 24489 Query 71115 TAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGT 71174 | | | | | ||||| | ||||| || || |||||||||||||| || | | || Sbjct 24490 AAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGT 24549 Query 71175 GTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGA 71234 ||| || || || |||||||| | || || |||||||| || |||||||| || || Sbjct 24550 GTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGA 24609 Query 71235 TGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGT 71280 || |||||||||||||| | | || | |||||| | ||||||| Sbjct 24610 AGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCATGT 24655 Score = 147 bits (162), Expect = 3e-30 Identities = 414/632 (66%), Gaps = 18/632 (3%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || ||||||||||| | || || |||||||| || ||| | ||| || | | Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || ||| | || |||||||| || | || | ||| ||| ||||| | ||||| || Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 |||||||| ||||| | | ||||||||| |||||||| || ||||| | ||| | || Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCC 25998 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 || ||||| |||| || | ||| || | | ||| |||||| | || || || |||| Sbjct 25999 GTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCA 26058 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 ||||| |||| | || | |||||| | || || || || || || || Sbjct 26059 ATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTC 26118 Query 72322 GAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATC---CAT 72377 || || | |||||| | || | | | | || ||||| || || || ||| Sbjct 26119 GAAATGTAGGCGCATTGCGCCAAGCAGGTGA-AAATCCCCTCGATCGAGTCTTCGGGCAT 26177 Query 72378 CATGTTAAGTA-----GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 72432 ||| || | ||| | |||| ||||||| ||| |||| || Sbjct 26178 CATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTG-----TAG---CCGCCGAGAAC 26229 Query 72433 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 72492 | || ||| |||||||||||| || | || || || |||||| || || ||| | Sbjct 26230 AGAGTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACG 26289 Query 72493 GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTT 72552 | || ||||| || ||||| || || || ||||| | |||||| ||||| ||| Sbjct 26290 GCATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTT 26349 Query 72553 TCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 72612 || |||||||| ||| || || | || ||| | || || |||||||| || || Sbjct 26350 TCGACGATCTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTTTTAAAGCCGAAG 26409 Query 72613 TAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 || ||||| |||||||| | ||||||||||| Sbjct 26410 TAATTGTAGGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670917682117800