Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 131 2e-25
seq9764 116 4e-21
seq22504 104 2e-17
>seq9911
Length=12084
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| || ||||| ||||| || | ||||||||||||||| || || |||||
Sbjct 4352 CCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAA 4411
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| || || | |||||| || ||| | |||| ||||||||| || ||||||
Sbjct 4412 AGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGT 4471
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| |||||| ||| | | ||| | ||||||| ||||| |||
Sbjct 4472 ATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACT 4531
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || || || || | |||||||| || ||||||||
Sbjct 4532 TCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || || || || ||||| | || || |||||||| ||||| |||||
Sbjct 5264 CCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAA 5323
Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| || | || | ||||| | ||||||||||||| |||||| |||||| || || || ||
Sbjct 5324 AGAGTACGTCCA-TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGG 5382
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| |||||||| || ||||||| ||||| | ||| | || || | || || ||
Sbjct 5383 GATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCAC 5442
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||| | ||| | |||||| || || ||||| || |||||||| ||||||
Sbjct 5443 TTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCATA 5491
Score = 116 bits (128), Expect = 4e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
||||| || ||||| || | || ||||| | |||||||| ||||| || ||||||||
Sbjct 4121 TGGCCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCT 4180
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
| || | | ||||| | |||||| || ||| |||||| ||| |||||||| |||
Sbjct 4181 GAAAGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGA 4240
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || |||||||| || |||||| ||| | | ||| | || || | ||||||
Sbjct 4241 GGAATACCTTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCT 4300
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
||||| | || | || || || || | || || || |||||||||||| ||
Sbjct 4301 ACTTCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCATACCT 4354
Score = 113 bits (124), Expect = 5e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| || || || || | |||| || ||||| ||||| || |||||||| |
Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATC--TG 4865
Query 143018 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075
|| | | ||| ||||| | ||| || |||||| | |||| |||||| ||||||||||
Sbjct 4866 ATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAG 4925
Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135
| || ||||| ||||| ||| ||| ||| | | ||| | || || | ||||| |
Sbjct 4926 GGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCA 4985
Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||||| || | ||||| || || || ||||| || || || ||||||
Sbjct 4986 CTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCATA 5035
Score = 109 bits (120), Expect = 6e-19
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 143026
|| || || |||||||||| |||||||| ||||| ||||| ||||| | | | | |
Sbjct 5045 AATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATC--TGAAAGGGTAC 5102
Query 143027 GAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 143084
|| ||||| | |||||||||||| | || || ||||| ||||| || || || ||||
Sbjct 5103 GACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTT 5162
Query 143085 CTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAG 143144
|||| || || || ||||| | ||| | || || | ||||| ||||| | ||
Sbjct 5163 CTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAG 5222
Query 143145 TCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
| | ||||| || || || ||||| || || |||||||||
Sbjct 5223 TGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCATA 5263
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| ||| | ||| || ||||| | || |||||||| || ||||| |||||
Sbjct 4580 CCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGAT 4639
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | |||||||||||| | || | ||| || ||||| ||||||
Sbjct 4640 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGT 4699
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||||||||| | | || | ||| || | || | || || | ||||| ||
Sbjct 4700 ATTCCTTCTTTGTC-TTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCAC 4758
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | || | ||||| || || | ||||| || || ||||||||
Sbjct 4759 TTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806
>seq9764
Length=88291
Score = 116 bits (128), Expect = 4e-21
Identities = 132/173 (76%), Gaps = 8/173 (5%)
Strand=Plus/Plus
Query 157047 TATTGACGGCAATCGACGCTAGATTACATACGGCAGTTTCGTC---GGGCGCGCAATATT 157103
|||| ||||||||||||||||||||||| || ||| ||||||| || || ||| |
Sbjct 25326 TATTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACG---TATACT 25382
Query 157104 GTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACT-TTGATTGCTT 157162
||| || || | || || ||||| | ||| ||| ||| || | || ||| ||||||
Sbjct 25383 CTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCC-CAGGTTCTGTTGGTTGCTT 25441
Query 157163 TTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTG 157215
|| || ||||||||||||||||| | |||||| || || |||||||| ||||
Sbjct 25442 TTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCACTTG 25494
>seq22504
Length=90246
Score = 104 bits (114), Expect = 2e-17
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 143026
|||||||| || || || | || ||||| || || || || ||||| || | | |
Sbjct 25749 AAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCG--ATAGAGTAC 25692
Query 143027 GA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 143084
|| |||||| | ||||||||||| | || ||||||||||||||||| || || ||||
Sbjct 25691 GACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTT 25632
Query 143085 CTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAG 143144
| ||||| |||||| |||| | ||| | ||| || | ||||| || || | |
Sbjct 25631 CCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGG 25572
Query 143145 TCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
| | || || || || | |||||| ||||| ||||||||
Sbjct 25571 TTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| |||||||| || || || | || |||||||| || || || |||||
Sbjct 21213 CCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCG-- 21156
Query 143018 ATTGTGCTCGA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075
|| | | ||| |||||| | ||||||||||| | || ||||||||||||||||| |
Sbjct 21155 ATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTG 21096
Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135
| || ||||| ||||| |||||| |||| | ||| | ||| || | ||||| |
Sbjct 21095 GGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAA 21036
Query 143136 CTTC 143139
| ||
Sbjct 21035 CCTC 21032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506847053559600
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