Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 100 4e-16
seq9764 91.5 2e-13
>seq22639
Length=125898
Score = 100 bits (110), Expect = 4e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 70202 GATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCA 70261
||||| | ||| | ||||| |||||||||| | ||| | | ||||||| || |||
Sbjct 12701 GATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATACCTAAAATGGCTCTTCCA 12642
Query 70262 CCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA-TGGCAAATTGTCATGCTTAATGTA 70320
|| || || || |||| || |||| | | ||| | | | || || ||| | | ||
Sbjct 12641 CCTTGCCATTGCTTGGTACAATTTTT-TGTTGCGAATAACGAGTTATCTTGCCTTTTATA 12583
Query 70321 TCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTT 70380
||| || |||||| ||||| || || ||||| ||||| |||||||||||| | | ||
Sbjct 12582 TCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTAATATTGCAAGCTATGCCTTATT 12523
Query 70381 GACGCACATGATTGCTCACATTACCGG 70407
|| ||||||| ||||||||||| ||
Sbjct 12522 AACCTACATGATCGCTCACATTACTGG 12496
>seq9764
Length=88291
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890
||||| ||||| || | | |||| | | | || |||||| || || || || ||
Sbjct 26027 GTGCCGATGCTAAGGGTTTTCAATAATACGGCGCGTTACGTTGATCAAGGTGGAAACAAG 25968
Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950
|||| || ||| | ||| | |||||||| || |||||||| || | || || || |
Sbjct 25967 AGGCCGGGAGCTTTCGCCATTTACTTGGAGCCCTGGCACGCCGATATCTTGGATTTCTTG 25908
Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010
| || || || | ||| | ||||| || || || ||||| ||||||||||| ||
Sbjct 25907 AATTTGAAGAAGAATACCGGCATCGAAGAAGCGCGTGCTAGGGATTTGTTTTATGCCCTT 25848
Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTC 97040
||| | || || ||||| ||||| ||||||
Sbjct 25847 TGGATACCCGACTTGTTTATGAAACGCGTC 25818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740814604147800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |