Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq22639 100 4e-16 seq9764 91.5 2e-13 >seq22639 Length=125898 Score = 100 bits (110), Expect = 4e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 70202 GATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCA 70261 ||||| | ||| | ||||| |||||||||| | ||| | | ||||||| || ||| Sbjct 12701 GATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATACCTAAAATGGCTCTTCCA 12642 Query 70262 CCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA-TGGCAAATTGTCATGCTTAATGTA 70320 || || || || |||| || |||| | | ||| | | | || || ||| | | || Sbjct 12641 CCTTGCCATTGCTTGGTACAATTTTT-TGTTGCGAATAACGAGTTATCTTGCCTTTTATA 12583 Query 70321 TCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTT 70380 ||| || |||||| ||||| || || ||||| ||||| |||||||||||| | | || Sbjct 12582 TCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTAATATTGCAAGCTATGCCTTATT 12523 Query 70381 GACGCACATGATTGCTCACATTACCGG 70407 || ||||||| ||||||||||| || Sbjct 12522 AACCTACATGATCGCTCACATTACTGG 12496 >seq9764 Length=88291 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 ||||| ||||| || | | |||| | | | || |||||| || || || || || Sbjct 26027 GTGCCGATGCTAAGGGTTTTCAATAATACGGCGCGTTACGTTGATCAAGGTGGAAACAAG 25968 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 |||| || ||| | ||| | |||||||| || |||||||| || | || || || | Sbjct 25967 AGGCCGGGAGCTTTCGCCATTTACTTGGAGCCCTGGCACGCCGATATCTTGGATTTCTTG 25908 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 | || || || | ||| | ||||| || || || ||||| ||||||||||| || Sbjct 25907 AATTTGAAGAAGAATACCGGCATCGAAGAAGCGCGTGCTAGGGATTTGTTTTATGCCCTT 25848 Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTC 97040 ||| | || || ||||| ||||| |||||| Sbjct 25847 TGGATACCCGACTTGTTTATGAAACGCGTC 25818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740814604147800