Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq9911 159 2e-34 seq22504 89.7 4e-13 >seq9911 Length=12084 Score = 159 bits (176), Expect = 2e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||| ||| |||||||| || || ||||||||| || |||||||| Sbjct 5263 ACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGA 5322 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | ||| |||| ||||||||||| || ||||| ||||| ||||| ||||| | || Sbjct 5323 AAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGG 5382 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| ||||||| ||| || | ||| |||||| | |||||||| Sbjct 5383 GATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCAC 5442 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || || || ||||| ||||| || ||||| ||||| Sbjct 5443 TTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952 ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| | Sbjct 5983 ACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 6042 Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 | | || || |||| |||||||| || || ||||| ||||| || || || || | | Sbjct 6043 TAGAGTG-CGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGG 6101 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||| || || || ||| || | | | || |||| || |||| Sbjct 6102 GAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCA 6161 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | |||||||||||||| ||||||||||||||||| || ||||| Sbjct 6162 CTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210 Score = 145 bits (160), Expect = 5e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||||||||| || || || || || || |||||||| ||||||||||| | Sbjct 4351 ACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATC-TG 4409 Query 43954 TAATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || | || |||| ||||||||||| || ||||| ||||| ||||||||||| ||| Sbjct 4410 AAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAG 4469 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 ||| ||||||||| ||| |||||| ||| || | ||| || || | || |||| Sbjct 4470 GTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCA 4529 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | ||||||||||| || || | ||| || ||||| |||||||| Sbjct 4530 CTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGA-CGCTCATCGTC 43971 ||||||||||| || || ||||||||||| ||||| | || | ||| |||| || Sbjct 4142 ACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATC-TGAAAGAGTTCGCCCATCTTC 4200 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 |||||||||||||||||| ||||| || ||||| || |||| | |||||||||||| Sbjct 4201 CAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTG 4260 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 |||||| ||| || | ||| ||||||| || || || || | || || ||||| Sbjct 4261 AATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTT 4320 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | ||||| |||||||||||||| Sbjct 4321 CCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| ||||| || ||||||||||| ||| ||||| ||||| |||||||| | Sbjct 4580 CCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGAT 4639 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || ||| |||| ||||| ||||| || ||||| || || || || || || ||||| Sbjct 4640 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGT 4699 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||||| ||| || || |||| | | | | |||||| | || ||||| Sbjct 4700 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACT 4759 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || || || || | ||| |||||||| |||||||| Sbjct 4760 TCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTT 43953 ||||||||||| | ||| |||| || || || || ||||||||||| ||||| | | Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGAT 4867 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | || || |||| |||||||| || || ||||||||||| ||||| || || |||| Sbjct 4868 AGAGTG-CGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGG 4926 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||| || ||| ||| ||| ||| || | | | ||||| || || ||||| Sbjct 4927 GATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCAC 4986 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| |||||||| || ||||| || ||||| Sbjct 4987 TTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || ||||||| ||| || ||||| || || || ||||| || |||||||| | Sbjct 5035 ACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATC-TG 5093 Query 43954 TAATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || | ||| |||| || |||||||| || || ||||| | ||||| || || | | Sbjct 5094 AAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTG 5153 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | |||||||||||| || || ||| || | ||| ||||| | || || | Sbjct 5154 GAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAA 5213 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | || || || || || |||||||| || ||||| |||||||| Sbjct 5214 CTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 >seq22504 Length=90246 Score = 89.7 bits (98), Expect = 4e-13 Identities = 167/244 (68%), Gaps = 1/244 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || ||||| | |||||||| || | ||| || || || ||||||||||| Sbjct 25759 ACCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCGA 25700 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || ||| | || ||||| ||||| || || ||||| | |||||||| || | || Sbjct 25699 TAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGG 25640 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| |||||| || || | | | ||||| | || || || Sbjct 25639 GATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAAC 25580 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCA-TGTCGAGTCTTT 44132 |||| || |||||||| || || | || ||||| || ||||||| ||| | || | | Sbjct 25579 CTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCATTGTAGCGTTTCT 25520 Query 44133 GTAA 44136 |||| Sbjct 25519 GTAA 25516 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||| | || ||||| |||| ||| ||||| |||||||||||||| Sbjct 21214 ACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCGA 21155 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || ||| | || ||||| ||||| || || ||||| | |||||||| || | || Sbjct 21154 TAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGG 21095 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| |||||| || || | | | ||||| | || || || Sbjct 21094 GATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAAC 21035 Query 44074 ATCGACCGTAATTGTTTTACCGGT 44097 |||| || |||||||| || || Sbjct 21034 CTCGAGGGTTATTGTTTTCCCTGT 21011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354663428687940