Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 214 4e-50
seq9911 201 3e-46
seq22504 156 1e-32
>seq1220
Length=9943
Score = 214 bits (236), Expect = 4e-50
Identities = 434/630 (69%), Gaps = 22/630 (3%)
Strand=Plus/Minus
Query 268701 GATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTG 268760
||||||| | || |||||| | || ||||| ||| | |||||||| |||| |
Sbjct 8044 GATTTGTTGTTTTCCCAATAGAATATCCCGATATTTGGGCTAAATACAAACAAGCCGAAG 7985
Query 268761 CTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATT 268820
| || |||||||| |||||||||||| | ||| || || ||||||| || |
Sbjct 7984 CCTCGTTTTGGACAACCGAAGAAGTAGATTTATCTAGAGATATAGATCATTGGAATAAAT 7925
Query 268821 TAAAACCAGAAGAAAGAAGATTTATATCTTATAT-TCTTG-CGTTTTTTGCAGTTAGTGA 268878
||| || || ||| |||| |||| ||| ||||| | ||||| || | ||
Sbjct 7924 TAACCGATGACGAGAGAC-ATTT-TATCAAATACGTCTTGGCATTTTTCGCTGCATCCGA 7867
Query 268879 TGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT-GTCAAGAGGTACAGATTCCTGAAG 268937
||| |||||||| |||||||| || || | ||| | |||||||||| || | ||||||
Sbjct 7866 TGGAATCGTTAATGAAAATCTGGTGGA-ACGTTTTAGTCAAGAGGTTCAAGTAACTGAAG 7808
Query 268938 CCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTC 268997
|| | ||||||||||| || || || || || || ||||||||| || ||||||||
Sbjct 7807 CCCGGTGTTTTTACGGTTTTCAAATTGCAATTGAGAATATTCATAGCGAAATGTACAGCA 7748
Query 268998 TATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATGA 269057
| | || || || ||||| || ||||| ||||| | |||| ||| |||
Sbjct 7747 TGCTTATTGAAACGTATATCAGCGACC----CGAAAGAGAAAGAAT-TTTTATTCAATGC 7693
Query 269058 GAACTATGGACTG---TGTG-AGa-aaaaaaTCTGAATGGGCTCTGAAATGGATAAACGA 269112
|| | ||| || | || |||||| || | ||||| ||| ||||||| | |
Sbjct 7692 GATAGAAACACTACCTTGCGTAGCCAAAAAAGCTAACTGGGCCCTGCAATGGATCAGCAG 7633
Query 269113 TAGCG---CGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTT 269169
|| | || | | ||| || | ||||| ||||| || || || ||||| || |||||
Sbjct 7632 TAAAGAGGCGACCTTCGGTGAGCGTTTAGTAGCTTTCGCTGCAGTCGAAGGAATTTTCTT 7573
Query 269170 TTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAAC 269229
|| || ||||| | || ||||||||||| || ||||| |||||||| || ||||
Sbjct 7572 CTCCGGAAGCTTTGCTTCAATTTTTTGGTTGAAAAAGAGAGGACTTATGCCGGGTCTAAC 7513
Query 269230 TTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATT 269289
|||||| || ||||| ||| | | || ||||| || || | || || ||||| |||||
Sbjct 7512 TTTCTCCAATGAATTAATATCCCGCGATGAAGGATTGCATTATGAATTTGCTTGCTTATT 7453
Query 269290 ATTTACTAATTATCTTTCACACAAACCTTC 269319
|||| | |||| || ||| ||||| ||
Sbjct 7452 ATTTTC---TTATATTGTACAAAAACCGTC 7426
>seq9911
Length=12084
Score = 201 bits (222), Expect = 3e-46
Identities = 183/231 (79%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||||| || | ||| | ||||| || |||||||||||||| ||||| |||
Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| ||| | ||| ||||| | ||||| ||||||||||||| | ||||||||| |||
Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|||||||||||||| || || ||||| ||||| |||| || | ||||| ||||||
Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | |||||| ||||| || ||||| ||||| ||||| || ||||||
Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807
Score = 197 bits (218), Expect = 3e-45
Identities = 184/231 (80%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||| | || | ||| || || | || ||||| || |||||||| || ||
Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCT 4864
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||||||| | ||| ||||| | ||| || |||||||| || | | |||||||| |||
Sbjct 4865 GATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGA 4924
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC-GCTAGGTTC 104508
|| |||||||| || || |||||||||||||| |||||||||| |||||| ||| |||||
Sbjct 4925 GGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCT-GGTTC 4983
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || |||||||||||||||||||| | ||||| ||||| ||||||||
Sbjct 4984 CACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
||||| | || | |||||| | ||||| |||||||| || |||||||| || || ||
Sbjct 4124 CCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAA 4183
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
||||||| || ||||| | ||||||||| ||||| || | | ||| ||||| |||||
Sbjct 4184 AGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGA 4243
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||||||||||||||| || ||||| || ||||| | ||||| |||||||||
Sbjct 4244 ATACCTTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACT 4303
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| | ||| ||||| || |||||||| || || |||||||| |||||
Sbjct 4304 TCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 172 bits (190), Expect = 1e-37
Identities = 164/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409
||||| ||| | |||||||| || || || ||||| || || || || | ||| |||||
Sbjct 5053 TACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTC 5112
Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
|| |||||| ||||| || ||||| | ||||||||||| || || ||||||||||||||
Sbjct 5113 TAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTG 5172
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||||| |||||||||||||| | |||||| ||||| || |||| || || |||||
Sbjct 5173 GATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTT 5232
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||| ||||| || |||||
Sbjct 5233 TCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262
Score = 168 bits (186), Expect = 2e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | || | ||| | ||| || |||||||||||||| || |||
Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||||||| | ||| ||||| | ||| || || ||||| || | | ||||||||| ||
Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| ||||| ||||| ||||||||||| || | ||| || ||||||
Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || | |||||| || |||||||| | || || ||||| |||||||||
Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211
Score = 154 bits (170), Expect = 3e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||| || | |||||||||||| || |||||||| || || || || | || || ||
Sbjct 4370 ACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCC 4429
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
| |||||| || |||||||| | | || || || |||||||| |||||||| || ||
Sbjct 4430 AATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTGG 4489
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
|| |||||||| || ||||| | ||| || ||||| || |||| |||||| || ||
Sbjct 4490 ATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTT 4549
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|||||||| ||||||||||| || ||||||
Sbjct 4550 CCAGTAAGAGTTTTTACAAAGATTTGCATT 4579
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409
||| | ||| | || || ||||| || || ||||| ||||| ||||| | || |||||
Sbjct 5281 TACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTC 5340
Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
| |||||| |||||||| || | | ||||| || || || || ||||||||||| ||
Sbjct 5341 CAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTG 5400
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||||||||||||||| | ||||| || || || || | ||||| |||||
Sbjct 5401 AATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTT 5460
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||| || || |||||||||||
Sbjct 5461 CCCAGTTAATGTCTTGACGAATATCTGCAT 5490
Score = 145 bits (160), Expect = 2e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| | ||| || | ||| | |||||||| || || ||||||||||||
Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||| || ||||| | ||| || ||||| || |||| | ||||| || ||
Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| ||||||||||| ||||| | |||||| || ||
Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | |||||| || || ||||| | ||||| ||||| || |||||
Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| | ||| || | ||| | |||||||| || || ||||| ||||||
Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || | || ||||| | ||| || ||||| || |||| | ||||| || ||
Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| ||||||||||| ||||| | |||||| || ||
Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | |||||| || || ||||| | ||||||||||| || |||||
Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
>seq22504
Length=90246
Score = 156 bits (172), Expect = 1e-32
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| ||||| |||||||| || |||||||| | ||||||||| | |||
Sbjct 25734 TGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGT 25675
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| || || || | || ||||| || || || ||||| || || ||||| ||
Sbjct 25674 TTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTA 25615
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
|| ||||||||||| | |||||| |||||| ||||| || || || || || || |||
Sbjct 25614 GCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTA 25555
Query 104537 AGTGTTTTTACAAATATCTGCATT 104560
|||||||| || || || ||||||
Sbjct 25554 AGTGTTTTCACGAAAATTTGCATT 25531
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
||||| || |||||||||||||||||||| || |||||||| | ||||||||| | |||
Sbjct 21189 TGTAAGGTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGT 21130
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| || || || | || ||||| || || || ||||| || || ||||| ||
Sbjct 21129 TTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTA 21070
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| ||||||||||| | |||||| |||||| ||||| || || || || || || ||
Sbjct 21069 GCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 21011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151008865729740
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