Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1220 214 4e-50 seq9911 201 3e-46 seq22504 156 1e-32 >seq1220 Length=9943 Score = 214 bits (236), Expect = 4e-50 Identities = 434/630 (69%), Gaps = 22/630 (3%) Strand=Plus/Minus Query 268701 GATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTG 268760 ||||||| | || |||||| | || ||||| ||| | |||||||| |||| | Sbjct 8044 GATTTGTTGTTTTCCCAATAGAATATCCCGATATTTGGGCTAAATACAAACAAGCCGAAG 7985 Query 268761 CTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATT 268820 | || |||||||| |||||||||||| | ||| || || ||||||| || | Sbjct 7984 CCTCGTTTTGGACAACCGAAGAAGTAGATTTATCTAGAGATATAGATCATTGGAATAAAT 7925 Query 268821 TAAAACCAGAAGAAAGAAGATTTATATCTTATAT-TCTTG-CGTTTTTTGCAGTTAGTGA 268878 ||| || || ||| |||| |||| ||| ||||| | ||||| || | || Sbjct 7924 TAACCGATGACGAGAGAC-ATTT-TATCAAATACGTCTTGGCATTTTTCGCTGCATCCGA 7867 Query 268879 TGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT-GTCAAGAGGTACAGATTCCTGAAG 268937 ||| |||||||| |||||||| || || | ||| | |||||||||| || | |||||| Sbjct 7866 TGGAATCGTTAATGAAAATCTGGTGGA-ACGTTTTAGTCAAGAGGTTCAAGTAACTGAAG 7808 Query 268938 CCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTC 268997 || | ||||||||||| || || || || || || ||||||||| || |||||||| Sbjct 7807 CCCGGTGTTTTTACGGTTTTCAAATTGCAATTGAGAATATTCATAGCGAAATGTACAGCA 7748 Query 268998 TATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATGA 269057 | | || || || ||||| || ||||| ||||| | |||| ||| ||| Sbjct 7747 TGCTTATTGAAACGTATATCAGCGACC----CGAAAGAGAAAGAAT-TTTTATTCAATGC 7693 Query 269058 GAACTATGGACTG---TGTG-AGa-aaaaaaTCTGAATGGGCTCTGAAATGGATAAACGA 269112 || | ||| || | || |||||| || | ||||| ||| ||||||| | | Sbjct 7692 GATAGAAACACTACCTTGCGTAGCCAAAAAAGCTAACTGGGCCCTGCAATGGATCAGCAG 7633 Query 269113 TAGCG---CGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTT 269169 || | || | | ||| || | ||||| ||||| || || || ||||| || ||||| Sbjct 7632 TAAAGAGGCGACCTTCGGTGAGCGTTTAGTAGCTTTCGCTGCAGTCGAAGGAATTTTCTT 7573 Query 269170 TTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAAC 269229 || || ||||| | || ||||||||||| || ||||| |||||||| || |||| Sbjct 7572 CTCCGGAAGCTTTGCTTCAATTTTTTGGTTGAAAAAGAGAGGACTTATGCCGGGTCTAAC 7513 Query 269230 TTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATT 269289 |||||| || ||||| ||| | | || ||||| || || | || || ||||| ||||| Sbjct 7512 TTTCTCCAATGAATTAATATCCCGCGATGAAGGATTGCATTATGAATTTGCTTGCTTATT 7453 Query 269290 ATTTACTAATTATCTTTCACACAAACCTTC 269319 |||| | |||| || ||| ||||| || Sbjct 7452 ATTTTC---TTATATTGTACAAAAACCGTC 7426 >seq9911 Length=12084 Score = 201 bits (222), Expect = 3e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||||| || | ||| | ||||| || |||||||||||||| ||||| ||| Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||| | ||| ||||| | ||||| ||||||||||||| | ||||||||| ||| Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 |||||||||||||| || || ||||| ||||| |||| || | ||||| |||||| Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | |||||| ||||| || ||||| ||||| ||||| || |||||| Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 197 bits (218), Expect = 3e-45 Identities = 184/231 (80%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || | ||| || || | || ||||| || |||||||| || || Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCT 4864 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||||||| | ||| ||||| | ||| || |||||||| || | | |||||||| ||| Sbjct 4865 GATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGA 4924 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC-GCTAGGTTC 104508 || |||||||| || || |||||||||||||| |||||||||| |||||| ||| ||||| Sbjct 4925 GGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCT-GGTTC 4983 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||||||||||||||| | ||||| ||||| |||||||| Sbjct 4984 CACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 ||||| | || | |||||| | ||||| |||||||| || |||||||| || || || Sbjct 4124 CCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAA 4183 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 ||||||| || ||||| | ||||||||| ||||| || | | ||| ||||| ||||| Sbjct 4184 AGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGA 4243 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||||||||||||||| || ||||| || ||||| | ||||| ||||||||| Sbjct 4244 ATACCTTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACT 4303 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | ||| ||||| || |||||||| || || |||||||| ||||| Sbjct 4304 TCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| ||| | |||||||| || || || ||||| || || || || | ||| ||||| Sbjct 5053 TACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTC 5112 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || |||||| ||||| || ||||| | ||||||||||| || || |||||||||||||| Sbjct 5113 TAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTG 5172 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||| |||||||||||||| | |||||| ||||| || |||| || || ||||| Sbjct 5173 GATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTT 5232 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| ||||| || ||||| Sbjct 5233 TCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || | || | ||| | ||| || |||||||||||||| || ||| Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||||||| | ||| ||||| | ||| || || ||||| || | | ||||||||| || Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| ||||| ||||| ||||||||||| || | ||| || |||||| Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | |||||| || |||||||| | || || ||||| ||||||||| Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| || | |||||||||||| || |||||||| || || || || | || || || Sbjct 4370 ACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCC 4429 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | |||||| || |||||||| | | || || || |||||||| |||||||| || || Sbjct 4430 AATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTGG 4489 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || |||||||| || ||||| | ||| || ||||| || |||| |||||| || || Sbjct 4490 ATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTT 4549 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||||||| ||||||||||| || |||||| Sbjct 4550 CCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| | || || ||||| || || ||||| ||||| ||||| | || ||||| Sbjct 5281 TACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTC 5340 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 | |||||| |||||||| || | | ||||| || || || || ||||||||||| || Sbjct 5341 CAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTG 5400 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||| ||||||||||||||||| | ||||| || || || || | ||||| ||||| Sbjct 5401 AATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTT 5460 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||| || || ||||||||||| Sbjct 5461 CCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||| || | ||| | |||||||| || || |||||||||||| Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||| || ||||| | ||| || ||||| || |||| | ||||| || || Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||| ||||||||||| ||||| | |||||| || || Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | |||||| || || ||||| | ||||| ||||| || ||||| Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||| || | ||| | |||||||| || || ||||| |||||| Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||| | ||| || ||||| || |||| | ||||| || || Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||| ||||||||||| ||||| | |||||| || || Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | |||||| || || ||||| | ||||||||||| || ||||| Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 >seq22504 Length=90246 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| ||||| |||||||| || |||||||| | ||||||||| | ||| Sbjct 25734 TGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGT 25675 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| || || || | || ||||| || || || ||||| || || ||||| || Sbjct 25674 TTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTA 25615 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || ||||||||||| | |||||| |||||| ||||| || || || || || || ||| Sbjct 25614 GCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTA 25555 Query 104537 AGTGTTTTTACAAATATCTGCATT 104560 |||||||| || || || |||||| Sbjct 25554 AGTGTTTTCACGAAAATTTGCATT 25531 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 ||||| || |||||||||||||||||||| || |||||||| | ||||||||| | ||| Sbjct 21189 TGTAAGGTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGT 21130 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| || || || | || ||||| || || || ||||| || || ||||| || Sbjct 21129 TTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTA 21070 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || ||||||||||| | |||||| |||||| ||||| || || || || || || || Sbjct 21069 GCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 21011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151008865729740