Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 104 2e-17
>seq9911
Length=12084
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| | ||| |||||||| |||||||||||| ||| || ||||| ||||||||||
Sbjct 5983 ACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 6042
Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
| | || || | || |||| ||||| ||| | | || || ||||| ||||| |
Sbjct 6043 TAGAGTG-CGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGG 6101
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | || ||| |||||| || || || | | | | ||||| || | || |||
Sbjct 6102 GAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCA 6161
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| || |||||||| || | ||| |||||||| ||||||||
Sbjct 6162 CTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| | || || || || ||||| || ||| || || |||||||| |||||||
Sbjct 4580 CCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGAT 4639
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
|| || | || |||| ||| ||||| | ||||||||||||| ||||| ||
Sbjct 4640 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGT 4699
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||| ||||| || || ||| | | | || ||||| | || |||
Sbjct 4700 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACT 4759
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| ||||| || || || ||||||||||||||||| |||||
Sbjct 4760 TCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421115636756405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |