Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq22639 125 9e-24 >seq22639 Length=125898 Score = 125 bits (138), Expect = 9e-24 Identities = 244/356 (69%), Gaps = 11/356 (3%) Strand=Plus/Plus Query 6898 TGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCC 6957 ||||| || | || |||||||| ||||| || | |||||| ||||| || | ||| Sbjct 12505 TGAGCGATCATGTAGGTTAATAAGGCATAGCTTGCAATATTAAACGGTACTCCAAGACCC 12564 Query 6958 ATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGA 7017 ||||| || ||||||||||| | | |||||||| || | | || ||||||| Sbjct 12565 ATATCGGCAGATCTTTGATATAAAAGGCAAGATAACTCGTTATTCGCAACAAAAAATTGT 12624 Query 7018 CACAATACATGACATGGAGGTAAAACAGCC---TGATCTATATCAGATGGATTCCAAGCA 7074 ||| ||| || || || || |||| | | ||||||| ||||||||| ||| Sbjct 12625 ACCAAGCAATGGCAAGGTGG---AAGAGCCATTTTAGGTATATCAACTGGATTCCATGCA 12681 Query 7075 GTCATTAAAATACGTCTATCATTTGGATTTGTTT--TTAATTTTGTTATAATTATTTGTA 7132 ||| | || |||||||||| || | | || ||| | | |||| | | | Sbjct 12682 CACATAATGATGCGTCTATCATGCGG--TCGATTCCTTATTGTATTTATCACTTCCATCA 12739 Query 7133 ATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAAT 7192 | |||||||| ||| | ||||| | ||| |||| |||||| ||| ||| ||| Sbjct 12740 ACTGATCTATCCCCCTATTAGTATAATCGGCATGCATATTTGTATAATCAGCCCCATAAT 12799 Query 7193 GTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGAT-GATTAAA 7247 | | ||||||||| || ||||| || |||| |||||||||||| | || ||||||| Sbjct 12800 GGCGCCATTGAAAGCCGTAAATTGGTCCTAGATCACCTTCTTCTCTATCGATTAAA 12855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595675324998000